Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03107 ATGGGAGCAGGTTCTTCAGGGGGTGAGATATGGAAGGCTCACACGGCGATGGCAGTGGTTCAATTATTCACTGGAGGCTATCATGTCATCACCAAGTTGGCACTTAACGTTGGGGTCAACCAAATTGTCTTTTGTGTCTTCCGCGATCTCCTTGCCCTTTCCATTCTCGCTCCCATCGCTTATTTCCGTGAAAAACGTACACGACCACCCCTAACCAAGCGCTTCATGATGTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCCACTCCAGTCTTTACATTTCTGTTGGCTCTAATGATGGGTACAGAAAGAGTGAACTTACTAAGATATGAAGGTCTGGCCAAGGTTGGGGGAATTTTTACCTGTGTTTTAGGTGCCATATTGATGGTTTTGTATCGTGGTCCAGCATTGATAGGATATTCAGAAATGGACCTTGTATCGCACAGTGAAATAAGTGCCAGAGGTCAACCAGAGCCTGCTGGATGGTTAATTGGTGGTTTAATGGATCTTGGATTAGACCATTTTCATGTTGGAGTTTTGTGCTTCATAGGGAACTGTATGTGCATGGCTGCTTTTCTAGCCATTCAGGCTCCTTTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCGTATTCATACTTCTTTGGAGCTTTGCTGATGGTAACTACGTCGTACTTCGTGACTGATGAGTCAACCGACTGGAGATTGACACAATCTGAAACATTTGCCGTATTTTATGCTGGAATTATCGCATCTGCCCTTAATTATGGAATCATTACATGGTCCAACAAGATCTTGGGGCCGGCCATGGTTGCCCTTTATAATCCACTCCAACCTGGGGCTTCTGCTCTCCTGTCCAGAATTTTTCTTGGAAGTCCAATTTACATGGGAAGCGTCATAGGTGGATCTTTGATCATTACTGGTCTATATGCGGTTACTTGGGCATCTTATAGAGAAAGACAGGCAACTGCTGGAGTTACTCCTCATGGCTCATGGATCCCTGAATCACTTATTCATGACAAGAGTTCATACCATAGAATTCACATTTTCTCAGGGGTCCCCGGCTTATCCCCAAAACCTTCAGATTAA 1164 0.4364 MGAGSSGGEIWKAHTAMAVVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFREKRTRPPLTKRFMMSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLALMMGTERVNLLRYEGLAKVGGIFTCVLGAILMVLYRGPALIGYSEMDLVSHSEISARGQPEPAGWLIGGLMDLGLDHFHVGVLCFIGNCMCMAAFLAIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWRLTQSETFAVFYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSVIGGSLIITGLYAVTWASYRERQATAGVTPHGSWIPESLIHDKSSYHRIHIFSGVPGLSPKPSD. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03107 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Seca11g03107 387 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020
Seca11g03107 387 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020
Seca11g03107 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 343 - -
Seca11g03107 387 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03107 Seca-Chr11 63446199 63453470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03107 9 272 Nodulin-like Gene Family AT3G45870 68.939 2.09e-123 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03107 - - gmx:100781969 682.559