Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03025 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATACTTTGAGTACAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTGCCCTTGAGGGTATTCCTCAAATGATATCAACCCTTGATGTGTATATTTCTGCTGAGAATAAAATAAATGGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTATAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCTTATGATGAGAAGAGAAATGGAAAAGCACGTAAAGGTTCAACTCTATTTGGAGGTTCAGCAAAAATAGGGGCTAATGGCAGTTACAATTTTACTAAGATTGCCCCTTCAAGTGCAAGGACTCCAAAGAACACTACTGCTAAGGAAAACACTTCATCTTCTACACATAAGTCAAAACCTACATTTTGGACTGCTTGCCATAATTGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTAAACTTTTGTGTCCCAACTGCCATCAGGTATTTTTGCTGTAG 588 0.3912 MECNKDEATRAKEIAERKFIAKDTLSTKKFALKAQNLFPALEGIPQMISTLDVYISAENKINGKLALMLHPDKNKSIGADGAYKLISEAWSLLSDKAKRAAYDEKRNGKARKGSTLFGGSAKIGANGSYNFTKIAPSSARTPKNTTAKENTSSSTHKSKPTFWTACHNCKMQYEYLRVYLNLKLLCPNCHQVFLL. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03025 195 Gene3D DnaJ domain 60 159 IPR036869 -
Seca11g03025 195 PRINTS DnaJ domain signature 78 98 IPR001623 -
Seca11g03025 195 PRINTS DnaJ domain signature 98 117 IPR001623 -
Seca11g03025 195 PRINTS DnaJ domain signature 62 77 IPR001623 -
Seca11g03025 195 SUPERFAMILY Chaperone J-domain 64 108 IPR036869 -
Seca11g03025 195 MobiDBLite consensus disorder prediction 135 158 - -
Seca11g03025 195 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Seca11g03025 195 CDD DnaJ 64 95 IPR001623 -
Seca11g03025 195 Pfam DnaJ domain 64 103 IPR001623 -
Seca11g03025 195 ProSiteProfiles dnaJ domain profile. 37 106 IPR001623 -
Seca11g03025 195 PANTHER BNAC03G44070D PROTEIN 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03025 Seca-Chr11 59944504 59945163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03025 4 193 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.455 4.41e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03025 - - lja:Lj2g3v0520120.1 323.939