Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03005 ATGAGTGAGTTTGCAGAGTTGCTTTTATCATTGTCATCTCTTGCAAACACCCAATTCCCTTTTACTTCATTAGACTTTCTCCCATTACTTAGACAAATTCTTGAGACAGGCTCAAGTTTTGATACCAAAGGGTCATGTTTGGGTGCCTTATACAACCTATCAACTGTGCTAGAGAATGCAGGCCCTTTGGTTTCTAGTGGGGTTGTCCCTACCCTCTTGGAACTGTCCTTAGTGAAAGAAATTTCAGAGAAGGCACTTGCCACTCTTGGGAACTTGTTGGTGACTTCGATGGGAAAGAAAGAAATAGAGAACAGCTCAATGGTGCCAAAAAGCTTTATTGAGATCTTGTCATGGGAAGAAAAACCCAAATGCCAAGAGTTGCCAGTTTATATTTTGATCATTCTGGCTCATCAAAGCTCATCACAAAGAGAGAAAATGGTACAGGCTGGGATTGTTCCTATGCTTCTTGAAGTGGTTTTATTGGGGAGCCCTTTAGCACAGAAGAGAGCACAGAAACTATTGCAATGGTTTAAGGATGAAAGGAAAACAAAGATGGGGCCACATTCAGATCCACAAACACCAAGATTTGCAATGGGAACACCTGTTAATCAAAGAGATGCAAAGGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAGCAAAGCCTACATAGGAATATGGAAATGATAACACAGAGGGCAAATGCAGCTGGGGAGTCTTCTAAACTGAAGTCTTTGGTCATCAGCACAAGTTCCAAGAGTTTACCTTACTAA 771 0.4125 MSEFAELLLSLSSLANTQFPFTSLDFLPLLRQILETGSSFDTKGSCLGALYNLSTVLENAGPLVSSGVVPTLLELSLVKEISEKALATLGNLLVTSMGKKEIENSSMVPKSFIEILSWEEKPKCQELPVYILIILAHQSSSQREKMVQAGIVPMLLEVVLLGSPLAQKRAQKLLQWFKDERKTKMGPHSDPQTPRFAMGTPVNQRDAKEGKKLMKSLVKQSLHRNMEMITQRANAAGESSKLKSLVISTSSKSLPY. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03005 256 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 3 256 - -
Seca11g03005 256 MobiDBLite consensus disorder prediction 183 208 - -
Seca11g03005 256 Gene3D - 2 187 IPR011989 -
Seca11g03005 256 SUPERFAMILY ARM repeat 22 175 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03005 Seca-Chr11 58975515 58976285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03005 7 194 U-box Gene Family AT1G67530 32.461 2.09e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03005 - - gmx:100813828 414.075