Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02995 ATGGCTGTATCTGATGAGAACAATTCCAACTCTATCGTGCCCAGAAACTTCCAAGGAGGTTTGAATCAAATGGGTGCCAGAATGGTTGGGCAGAACAGAAGAACTTTGAGCGTCATTAATCGGAATCTTGTTCAAGGTCGATCGTACCCTTACGTTGTTAACAAGAGGGCGTTGTCTGAAAAACATGAGGTTTCTGAAAAGAAGCAAGCAGATCCTGTGCATCGACCAATCACAAGGAGGTTTGCTGCACAAATTGCTAGCTCGCAGCAATCTTGTGCTGAGAAAACAAAGGCAAATGACTCAAACTCATCAAATCAGAATGGGTTTGGAAGCTCTATATACATCGATGGTGTACAAAAGTCACCAGCAGATGATGTACAAAAGTCACCAGCAGATGAACCAGTGCCCATGGCTCTAGAGCCAACTGAACCAATGCATAGTGATTCAGATCAGATGGAAGAAGTTGAGATGGAGGATATAAGTGAAGAACCTATCTTGGACATCGATAGCTATGATGTGAATAATCCTCTTGCAGTGGTGGAATATATTGAAGATATTCATTGTTTCTACAGAAAAGTTGAGGGTTTTAGCTGTGTTCCACCCAATTATATGGAACAACAATCTGACATTCATGAAAGGATGAGGGCAATACTGATTGACTGGCTTATTGAGGTGCATGACAAATTTGAACTTGTGCAAGAGACACTGTTTCTTACAGTTAATCTCATAGATAGATTCTTGGCAAAGCAAACAGTGGTGAGAAAGAAGCTTCAGCTGGTTGGTCTAGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTGTGTTCCTGTGGTTGGGGATCTAATCCATATATCTGACAAAGCATACACAAGGAAGGAAATTCTGGAAATGGAGAAGTTGATGCTCAACACTTTGCAGTTTAACATGTCTTTTCCAACAGCATATGTTTTCATGAGAAGGTTTCTGAAGGCAGCTCAAGCAGACAAAAAAGTCAGTACTCTTCAGCTTGAGCTGCTAGCTTTTTTCTTGGTAGAGCTGTCTCTGGTGGAATATGAGATGCTGAAGTTCCCACCATCTATGCTAGCTGCAGCTGCAGTCTACACAGCTCAATGCACTGTCAATGGTTTCAAAGACTGGAGTAAGACATGTGAATGGCATACAAACTACTCTGAAGATCAGCTATTGGAGTGCTCTATTCTGATGGTTGGGTTCCACCAAAAGGCTGGGACAGGGAAACTTACAGGGGTGCATAGGAAGTACTGCTCATCTAAATTTAGCTTCATTGCAAAATGTGAGCCAGCATGTTTTCTTCTGGAGAACCATGTTTAA 1332 0.4197 MAVSDENNSNSIVPRNFQGGLNQMGARMVGQNRRTLSVINRNLVQGRSYPYVVNKRALSEKHEVSEKKQADPVHRPITRRFAAQIASSQQSCAEKTKANDSNSSNQNGFGSSIYIDGVQKSPADDVQKSPADEPVPMALEPTEPMHSDSDQMEEVEMEDISEEPILDIDSYDVNNPLAVVEYIEDIHCFYRKVEGFSCVPPNYMEQQSDIHERMRAILIDWLIEVHDKFELVQETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVCVPVVGDLIHISDKAYTRKEILEMEKLMLNTLQFNMSFPTAYVFMRRFLKAAQADKKVSTLQLELLAFFLVELSLVEYEMLKFPPSMLAAAAVYTAQCTVNGFKDWSKTCEWHTNYSEDQLLECSILMVGFHQKAGTGKLTGVHRKYCSSKFSFIAKCEPACFLLENHV. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02995 443 PANTHER CYCLINS 127 413 IPR039361 -
Seca11g02995 443 MobiDBLite consensus disorder prediction 85 148 - -
Seca11g02995 443 FunFam G2/mitotic-specific cyclin-1 290 430 - -
Seca11g02995 443 Gene3D - 199 311 - -
Seca11g02995 443 SMART Cyclin_C_2 313 435 IPR004367 -
Seca11g02995 443 SMART cyclin_7 220 304 IPR013763 -
Seca11g02995 443 SMART cyclin_7 317 404 IPR013763 -
Seca11g02995 443 Pfam Cyclin, N-terminal domain 185 311 IPR006671 -
Seca11g02995 443 Pfam Cyclin, C-terminal domain 313 434 IPR004367 -
Seca11g02995 443 SUPERFAMILY Cyclin-like 312 434 IPR036915 -
Seca11g02995 443 SUPERFAMILY Cyclin-like 174 310 IPR036915 -
Seca11g02995 443 PIRSF Cyclin_A_B_D_E 4 443 IPR046965 GO:0016538|GO:0044772
Seca11g02995 443 Gene3D - 185 431 - -
Seca11g02995 443 CDD CYCLIN_AtCycB-like_rpt1 162 308 - -
Seca11g02995 443 MobiDBLite consensus disorder prediction 85 114 - -
Seca11g02995 443 ProSitePatterns Cyclins signature. 215 246 IPR006671 -
Seca11g02995 443 CDD CYCLIN_AtCycB-like_rpt2 313 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02995 Seca-Chr11 58628664 58631871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02995 1 439 Core Cell Cycle Gene Families AT1G20610 58.166 7.26e-178 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02995 K21777 - gmx:100779889 642.114