Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02994 ATGATGTTTATAAAGAATTCATTTTGGTTGAAGTTTCAATCTGAGATTAATCATCGCAAAGTTATCCTAAGGGATCCTGCTGGCTTTACTTTTAATGCTTCTATAAGTTGCAATGGGTATAATAGGGCTAGAATTATTAATGGAATCGAAAACATCATTAGGCTCTATAACTTGGTTGAGAGTTACTGGATGTTATTTACATATAAAGGGAACTGTGAGTTTGACTTTAGATTAGTGAAGGGAACATTGGAGGTCAATTATCCTAGGGTGGAAAGGGATGAAGATGTTGATGTCCATCCTGTGGAGTATGAGGAGGACCCTGAGGAGCCCTTATTTTTGTGGGAAGTTACTTTGACAAAGGTAGCTTCATCCGGTGGTAACGCTTTAATCATACCTGCTAGGATTGTGAGGGACATGTTGGACAAGAATCAGGAAGTTGTGACTGTTATAGATGAGGGTGGTAAATTAATTTCATGCAAGTTGCTGAAGCCTAAAAGACGACCAAGTGAGCGGTACCTATCCGGTGGATGGTATGAGTTTATTCGGGGAAAGAAATTGAAGGTTGGGGATAAGATTAGATTTTACTCAGATGATAGTATGGAAACTATGTCTGCGGTTGTAGATCGCATTTGA 633 0.3902 MMFIKNSFWLKFQSEINHRKVILRDPAGFTFNASISCNGYNRARIINGIENIIRLYNLVESYWMLFTYKGNCEFDFRLVKGTLEVNYPRVERDEDVDVHPVEYEEDPEEPLFLWEVTLTKVASSGGNALIIPARIVRDMLDKNQEVVTVIDEGGKLISCKLLKPKRRPSERYLSGGWYEFIRGKKLKVGDKIRFYSDDSMETMSAVVDRI. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02994 210 Gene3D - 98 209 IPR015300 -
Seca11g02994 210 SMART B3_2 115 210 IPR003340 GO:0003677
Seca11g02994 210 Pfam B3 DNA binding domain 116 200 IPR003340 GO:0003677
Seca11g02994 210 ProSiteProfiles B3 DNA-binding domain profile. 114 210 IPR003340 GO:0003677
Seca11g02994 210 SUPERFAMILY DNA-binding pseudobarrel domain 110 205 IPR015300 -
Seca11g02994 210 CDD B3_DNA 110 199 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02994 Seca-Chr11 58562225 58563118 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca11g02994 B3 1.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02994 - - mtr:11425977 66.6254