Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02993 ATGGATTTAAATAGTGATGATTCGGTTGTTAATTTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTCTAGCGATGATGAAAATCATAATCAAAATGATAGAGTAACTGATTTTGAGGATGAAGTTAATGAAAAAGAGGTAGACACTGATGAGGGAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAAGATAATTGATTTGACAATTGATGACATATGGGCATTGGAATTCTGTAGTGAAAATGATGCGTTCAATTTTTACTTTTCTTATGCAATATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAATAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTATGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGGAAAAAGGAACATGGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAGATAAGGGGTTTTCCTGTTTATCAAAAAGGAGGTTATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTGGGAGGGGTAAGATAAAAGATGGGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAACAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGGAAACTCACTCATCTGTTTTGGTGTGATGAAATAATTCGGGAAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCACTGGTGATTTTTTCTGGTAAAAATCACCACTCTCAGACAGTTATATTTGGGTGTGCACTCATTGCTGATGAAACAATCGATACTTATAAGTGGGTTTTAAGAATGTTTTTAGAAGCAATGTTCAACAAGCATCCAGCTGCAGTGGTGATTGATGGTGATGGTGCGATGAGGGAAGCTATTAAGGTAGTTTTTCCAAATGCTGCTCATAGGTTATGCGGGTGGCATTTGAATAGAAATGCATGTGAAAATGTTAAGAATCCTAAATTTTTGGATGATTTCAAGAAAGCAATGTACAATAATTTCACGCCAGAAAAATTTGAACAGTTTTGGGAGGAAATGGTAAATAAGCATGGTCTACAAGGGAATAGATGGATGTTGAAGACCTATGATATTAAGGAAATGTGGGCGTCTGCTTATTTGTGTGATAAATTCTTTACCCGCATAAGAACTACATCTCAGTGTGAAGGCATAAATTTGTTGATAAAGACCTATGTTAGGAGTAAGAATACAATTATTGAATTTATTCATAATTTTGAGCATTCTCTCAGGGAATATAGGTACAAAGAACTGACTTTAGACTTTAATTCTCTGTATACTGTACCCGTTCTCACTACTTCACTACAAAAGATTGAGAATCAAGCCTCTAAGGTTTTCACTTTGGATATTTTTAAAGATGTGAAGTATGAAATTGAAAAGGCAGGGGGATTAAATGTAATTGAACGTTCAGTAGATGGTGACAAAGTGAATTTCAAATTAAATGAATATTGTAAGCCTCAGAGTGAACATTTTGTTGTTTATGATAAAGAGAATTGTAAATTTATTTGTGATTTTCGGTTGTTTGAATCTTGTGGCATTCTTTGTTGA 1821 0.3531 MDLNSDDSVVNLEDDRDLSYSDSSSSSDDENHNQNDRVTDFEDEVNEKEVDTDEGNEFMDAEVGGEVSRKIIDLTIDDIWALEFCSENDAFNFYFSYAICHGFAVRRDDVIKDNKGMLIMRQFLCSMAGLRDKKHLIRLDRKKEHGPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPAKFVPLMPAYRGLSDGDKAQVDALHSHGVRPCQIRGFPVYQKGGYRNVGFSKKDLYNYIDEVGRGKIKDGDAVAGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDEIIREDYQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTVIFGCALIADETIDTYKWVLRMFLEAMFNKHPAAVVIDGDGAMREAIKVVFPNAAHRLCGWHLNRNACENVKNPKFLDDFKKAMYNNFTPEKFEQFWEEMVNKHGLQGNRWMLKTYDIKEMWASAYLCDKFFTRIRTTSQCEGINLLIKTYVRSKNTIIEFIHNFEHSLREYRYKELTLDFNSLYTVPVLTTSLQKIENQASKVFTLDIFKDVKYEIEKAGGLNVIERSVDGDKVNFKLNEYCKPQSEHFVVYDKENCKFICDFRLFESCGILC. 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02993 606 PANTHER OS01G0519700 PROTEIN 81 606 - -
Seca11g02993 606 MobiDBLite consensus disorder prediction 9 44 - -
Seca11g02993 606 Pfam MULE transposase domain 304 398 IPR018289 -
Seca11g02993 606 MobiDBLite consensus disorder prediction 45 59 - -
Seca11g02993 606 MobiDBLite consensus disorder prediction 1 59 - -
Seca11g02993 606 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02993 Seca-Chr11 58371433 58373253 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g02993 MULE 8.9e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02993 - - ccaj:109811679 708.753