Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02976 ATGCCTATATTAAAGGCTGAAGGAAAGGCTGAAGCACTCTGCACGCAATTAAATAATGCAAGTCATGTAGATGCTTGCATCACAGCTGACAGTGATGCATTCCTCTTTGGGGCGAAATGCATTAAAAAATGTTTCTCTCCCAGTTCCAAAGAAGCATTTGAATGCTACAATATGTCAGATATTGAAGCTGGGCTTGGACTGAAGAGGAAACACTTAATAGCTATCTCACTTGTGGTTGGAAATGATCATGATATGAATGGTGTTCAAGGGATTGGGCTTGATACTGCTCTCCATTTTGTTCAAGCTTTTAGTGAAGATGATATATTGAATAGATTACATGAGATAGCCAAAGGAAAGGCTTCAGAAGTTCCTATCAGCATTAGACTTGAGGACAATATGGATATGGATGGGAACTCCCCAAATACAAAACAACCTTACTGCTCATTCTGTGGGCATCCAGGCAGCAAAAGACATCATATGAAGTTTTCCTGCGAATATTGCATCTCAAATAAGCAATGA 519 0.395 MPILKAEGKAEALCTQLNNASHVDACITADSDAFLFGAKCIKKCFSPSSKEAFECYNMSDIEAGLGLKRKHLIAISLVVGNDHDMNGVQGIGLDTALHFVQAFSEDDILNRLHEIAKGKASEVPISIRLEDNMDMDGNSPNTKQPYCSFCGHPGSKRHHMKFSCEYCISNKQ. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02976 172 SMART xpgineu 1 67 IPR006086 GO:0004518
Seca11g02976 172 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 127 IPR006084 -
Seca11g02976 172 SUPERFAMILY PIN domain-like 2 82 IPR029060 -
Seca11g02976 172 Gene3D - 1 66 - -
Seca11g02976 172 Gene3D - 67 128 - -
Seca11g02976 172 Pfam XPG I-region 2 82 IPR006086 GO:0004518
Seca11g02976 172 FunFam Flap endonuclease GEN-like 1 67 125 - -
Seca11g02976 172 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 67 113 IPR036279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02976 Seca-Chr11 57735464 57735982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02976 1 141 Core DNA Replication Machinery Family AT5G26680 26.452 8.71e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02976 K15338 - gmx:100779848 286.189