Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02966 ATGTTTTCTAGTATTACTTTTATGCCTTTCTTCCTTTGTTTCTCCATTAGTTACATGTGTTTTCATTTGCCACTGCAGGTATATGATTTGACTCAATATTTGGATGATCATCCTGGTGGAGATGATGTAATCATTGTTGGGATCGGGAGAGATGCAACAAATGATTTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAAATAAATTCAGATAGCACTATTAGTCTAAGTTAG 243 0.358 MFSSITFMPFFLCFSISYMCFHLPLQVYDLTQYLDDHPGGDDVIIVGIGRDATNDFEDAGHSKSARELMEINSDSTISLS. 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02966 80 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 26 80 IPR001199 -
Seca11g02966 80 Gene3D - 16 75 IPR036400 -
Seca11g02966 80 PANTHER CYTOCHROME B5 26 70 - -
Seca11g02966 80 SMART Cyt_b5_2 14 72 IPR001199 -
Seca11g02966 80 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 33 40 IPR018506 GO:0020037
Seca11g02966 80 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 26 70 IPR036400 -
Seca11g02966 80 Pfam Cytochrome b5-like Heme/Steroid binding domain 26 69 IPR001199 -
Seca11g02966 80 PRINTS Cytochrome B5 signature 37 51 IPR001199 -
Seca11g02966 80 PRINTS Cytochrome B5 signature 52 59 IPR001199 -
Seca11g02966 80 PRINTS Cytochrome B5 signature 27 37 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02966 Seca-Chr11 57521728 57522091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02966 26 70 NADPH P450 reductases AT1G26340 68.889 1.59e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02966 K23490 - csv:101220127 62.7734