Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02945 ATGCTATCAAGGTTGATGGACTTCCTGAGCGCCTGCTGGCGGCGAAGATCGTCGGACCGCAAGGGCTCCGATGTTTCCGGGCGGAAGGAGGGGCTGCTGTGGTACAAGGACGGCGGTCAACACTTGTTTGGTGATTACTCAATGGCGGTTGTGCAGGCCAACAACTTGCTCGAGGATCAGAGCCAGATTGAGTCTGGTCCTCTCAGCTTCCTCGATACTGGCCCTTATGGTACTTTTGTTGGTGTGTATGATGGTCACGGTGGACCTGAGACATCGCGTTATATTTGTGATCACCTCTTCCAACATCTAAAACGATTTGCATCTGAGCAGAAGTCCATGTCTGTGGAGGTTATTCGGAAGGCATACCAAGCCACAGAAGAAGGTTTTCTGTCAGTGGTTACCAAACTGTGGCCTATGAATCCCCAAATTGCTGCTGTTGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGGTACCCTCTATATTGCTAACCTTGGTGATTCCCGTGCTGTGCTTGGGCGGGTTGTCAGGGCAACTGGGGAGGTTTTGGCGATCCAACTTTCGTCAGAGCATAATGTGGCCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCAGATGACTCAAAAATTGTGGTTCTAAAGCACAACGTGTGGCGTGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGTGATGTATACCTTAAAAAGGCAGAATTTAACAAGGAACCGTTGTATGCTAAGTTTCGTCTTCGGGAAACTTTCAAAAGGCCAATTTTGAGCTCTGACCCATCAATTTCTATTCATGAACTTCAACAGCATGATCAATTTCTGATATTTGCTTCGGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCACACAGTGTAAGATAA 927 0.4671 MLSRLMDFLSACWRRRSSDRKGSDVSGRKEGLLWYKDGGQHLFGDYSMAVVQANNLLEDQSQIESGPLSFLDTGPYGTFVGVYDGHGGPETSRYICDHLFQHLKRFASEQKSMSVEVIRKAYQATEEGFLSVVTKLWPMNPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLRETFKRPILSSDPSISIHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVR. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02945 308 Gene3D - 32 308 IPR036457 -
Seca11g02945 308 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Seca11g02945 308 Pfam Protein phosphatase 2C 78 303 IPR001932 -
Seca11g02945 308 CDD PP2Cc 43 306 IPR001932 -
Seca11g02945 308 ProSiteProfiles PPM-type phosphatase domain profile. 45 308 IPR001932 -
Seca11g02945 308 FunFam Phosphatase 2C family protein 34 308 - -
Seca11g02945 308 PANTHER PROTEIN PHOSPHATASE 28 304 IPR015655 GO:0004722|GO:0006470
Seca11g02945 308 SMART PP2C_4 37 307 IPR001932 -
Seca11g02945 308 SUPERFAMILY PP2C-like 54 303 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02945 Seca-Chr11 57043566 57051777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02945 1 306 PP2C-type Phosphatase Gene Family AT3G51370 78.431 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02945 K01102 - gmx:100777920 588.571