Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02932 ATGTTGTCATCATCAAATAGCAAGGAATGCAACTGCAGCTGCAACAAGAAGAGCATCAACAACAAAGGTTCCTCTTCTTCTTTTTCTTCAACAACAACAAGACTATCATTATCCCCTTCTTCATCTTCAACCCCCAACGTTTTGCAAACCCCAAAAAGCAACAAAACCATGGAAGATGTGTGGAAAGACATCAACCTTGCTTCCTTAACTGACCACAGTACCCACCACACAACCACCACCACTACCTCCAATAACTTGCCAGATACAACCAGCACTGTCTCCTCTTCTCCCTCAAACACAGCATCCCCTCTCACTGCCCTCAGCTTGAGCTCACACCACTTTGAACCTCTTAGCCACAAGGACTTGCAATTAGCACAGCTCCATGCTTCAAAGGTGGATCCTTTATGCAACCCATTTCAGAGCCAGCTGGATGGCAACTCAAGGGACAGGAGAACTAAGCGAATGATGAAGAACAGAGAATCTGCTGCCCGATCAAGAGCCAGAAAGCAGGAAAATATTGCTTCTTTCTTAATTTCCATCTCAAAAAGCTGGTTAATTAATTACTTTCGATTTGAGTTGCAGCAAAAAATTGAGCTCTTGCTAGCAGAGAATGCCAGACTCAGAACACAGCACCAAAGGGTACATTTTTTATTCTCTTTTCTTTGTTACCCGGTACAGGGCATGTTTCCCCATTTTGTTAACTTATATGATATGATATGTTATAGATATACTTAA 735 0.4231 MLSSSNSKECNCSCNKKSINNKGSSSSFSSTTTRLSLSPSSSSTPNVLQTPKSNKTMEDVWKDINLASLTDHSTHHTTTTTTSNNLPDTTSTVSSSPSNTASPLTALSLSSHHFEPLSHKDLQLAQLHASKVDPLCNPFQSQLDGNSRDRRTKRMMKNRESAARSRARKQENIASFLISISKSWLINYFRFELQQKIELLLAENARLRTQHQRVHFLFSFLCYPVQGMFPHFVNLYDMICYRYT. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02932 244 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 153 168 IPR004827 GO:0003700|GO:0006355
Seca11g02932 244 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 47 210 IPR043452 GO:0003700|GO:0045893
Seca11g02932 244 Coils Coil 190 210 - -
Seca11g02932 244 SMART brlzneu 146 227 IPR004827 GO:0003700|GO:0006355
Seca11g02932 244 MobiDBLite consensus disorder prediction 20 56 - -
Seca11g02932 244 MobiDBLite consensus disorder prediction 72 104 - -
Seca11g02932 244 Gene3D - 139 221 - -
Seca11g02932 244 MobiDBLite consensus disorder prediction 20 55 - -
Seca11g02932 244 CDD bZIP_plant_BZIP46 150 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02932 Seca-Chr11 56744509 56745422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02932 52 171 bZIP Transcription Factor Family AT2G17770 36.364 4.15e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02932 K14432 - gmx:102667912 99.7525