Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02906 ATGAAGTCCCTCTTTCCAAAGCAGCTTTCTGGATGGCTTCTAATCTTTTGTTGTTTTTCCATTGGCATCATCTTTCAACATGTTTCTGCTGTGAGTCTACCAAACAATGAAACTGTGCCAGCAGTCATTGTATTTGGAAACAACAACTATATAATGACTCTTACCAAATGTGATTTCCCACCATATGGTAGAGATTTTGCTGAAGGAAATCATCCAACCGGGAGGTTCAGCAATGGCTTAGTCCCATCAGATATCATTGCTGCAAAATTTGGAGTTAAGAAGCTTTTACCTGCTTATCTTGATCCTAATTTGCAACTTCAAGATCTCCTCAGTGGTGTAAGCTTTGCCTCTGGTGGTGCAGGATATGATCCTCTAACATCTGAATTAGCATTGGTGATATCATTATCAGGTCAATTAGATATGTTCAAGGAGTACATACAGAAGATAGAGGAAGCAGTTGGAAGAAACAGAACAGCAACAATAGTATCAAAGAGCATATACATAATTTGCATAGGAAGTGATGACATTGCCAATACTTATGCTCAATCACCATTTAGGCGTTATCAGTATGATATTTCATCATATACGGACTTAATGGCTTCAGAAGCCTTAAATTTCTTACAGGAGCTTTATGGAGTAGGAGCTAGAAGGATTGGAGTATTCAGTATACCAGTTATAGGGTGTGTTCCCTCACAGAGAACAATTGGTGGAGGTATATTCAGAGCATGTTCAGATTCTTCTAACCAAGCAGCAATACTCTTCAACTCAAAACTCTTCTCCCAAATGAGTGCACTACAAAAGAAGTTTTCAGACGCTAGGCTTGTCTATCTTGATTCTTACAACCCATTGCTGGACATCCTTCAAAACCCTGATAAATATGGTTTTAAAGAGACACAGAAAGGATGCTGTGGCACAGGGGATATAGAAGCCAGCATTTTGTGCAACCGTTACAGCATAAACACATGCTCAAATTCTTCTAACTATGTATTCTGGGATAGTTATCATCCTACAGAGAAGGCTTATAATGTGCTTAGCTCTCTATCAGTGTTGTCAGTAGAGGATCAACTAGATATGTTCAAAGAGTACATAGGAAAACTGAAGGCAGCTGTGGGGGAAAGTAGAACTGCTTTCATTCTAGCAAACAGCATAGTTATCATCAGCATGGGAAACAATGACATTATAAATACATATTTTCTGACACCATACCGGAAGGATGAGTTTGATGTTGACCAGTATACAAGTATGCTGGTCAATTTGTCTTCAAAATTTGTAGAGGTAAGCTTTTGA 1287 0.3862 MKSLFPKQLSGWLLIFCCFSIGIIFQHVSAVSLPNNETVPAVIVFGNNNYIMTLTKCDFPPYGRDFAEGNHPTGRFSNGLVPSDIIAAKFGVKKLLPAYLDPNLQLQDLLSGVSFASGGAGYDPLTSELALVISLSGQLDMFKEYIQKIEEAVGRNRTATIVSKSIYIICIGSDDIANTYAQSPFRRYQYDISSYTDLMASEALNFLQELYGVGARRIGVFSIPVIGCVPSQRTIGGGIFRACSDSSNQAAILFNSKLFSQMSALQKKFSDARLVYLDSYNPLLDILQNPDKYGFKETQKGCCGTGDIEASILCNRYSINTCSNSSNYVFWDSYHPTEKAYNVLSSLSVLSVEDQLDMFKEYIGKLKAAVGESRTAFILANSIVIISMGNNDIINTYFLTPYRKDEFDVDQYTSMLVNLSSKFVEVSF. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02906 428 Gene3D SGNH hydrolase 28 355 IPR036514 -
Seca11g02906 428 FunFam GDSL esterase/lipase APG 31 348 - -
Seca11g02906 428 Pfam GDSL-like Lipase/Acylhydrolase 64 346 IPR001087 GO:0016788
Seca11g02906 428 CDD SGNH_plant_lipase_like 40 342 IPR035669 -
Seca11g02906 428 PANTHER GDSL ESTERASE/LIPASE EXL3 346 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02906 Seca-Chr11 55858287 55865936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02906 347 425 Pollen Coat Proteome AT1G75910 40.000 4.79e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02906 - - ahf:112723705 545.043