Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02883 ATGGTTTTTGTTTCAAAAATTGGCTTATCTCTCTGTAAGCTGGTAACTATACTTATTACTTTGCAGTTCAATGGTGGTAGTGCATTTTTTGGTAATCCTAGAATAACTGTTCATATTACCAACTTGTTGAATAATGATTCTGAGTTGGGTCTTCATTGCAAAGACAAGAATCATGACCTTGGGTTTCATGTTCTACCAATTGGAGAAATGTACAGCTTCGGATTTCAGCCTTGTGTCATCGGTTGTGTTACGTTGTACTTTTGTAGGTTTACTTGGACAAAAGCAGAACACCACAGTCACCACTTTGACATCTATGATCAAAACAGAGATTCTTATGCTGAAATATTTGATTGGAACATACTAGAAACAGGACCATGCAAGAATAAAAAGGATTCATTGGAATGCTTTGTATGGAAAGATGAGACAAAGGCAGCATGA 438 0.363 MVFVSKIGLSLCKLVTILITLQFNGGSAFFGNPRITVHITNLLNNDSELGLHCKDKNHDLGFHVLPIGEMYSFGFQPCVIGCVTLYFCRFTWTKAEHHSHHFDIYDQNRDSYAEIFDWNILETGPCKNKKDSLECFVWKDETKAA. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02883 145 PANTHER - 34 130 IPR010264 -
Seca11g02883 145 Pfam Plant self-incompatibility protein S1 36 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02883 Seca-Chr11 55390842 55391300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02883 27 142 Carbohydrate Esterase AT3G16970 41.129 1.82e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02883 - - cam:101507265 126.716