Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02881 ATGGTTTTTGTTTCAAAAATTGTTTTATTTCTCGGTATGCTGGTAACTATACTTATCAGTATGCAATTCAATGGTTGTAATGCAGAGATTCTAACTGTTGAAATAAACAACAAGTTAAGTAATGATTCTGAGTTGGGTCTTCATTGCAAAGAAAAGAAACATGATCTTGGATTTCATGTTGTACCCGTTGGAGGATTCTACCGCTTCCACTTTTCGACAAATCCCTTCGTATTAATGTTGTATGTTTGTGGATTTAATTGGACAACAGCAGCAACAACACACCACTTTGACATCTATGATGGAAAGCGAGATGATTGTGGTACATGTGTTTGGGATATACAAGAAACAGGACCATGTCAGGTTTCTGAGAAGACACGGAAATGCTTTCTGTGGAACGACAAAGCGACAAAGGCAGTGTGA 420 0.3762 MVFVSKIVLFLGMLVTILISMQFNGCNAEILTVEINNKLSNDSELGLHCKEKKHDLGFHVVPVGGFYRFHFSTNPFVLMLYVCGFNWTTAATTHHFDIYDGKRDDCGTCVWDIQETGPCQVSEKTRKCFLWNDKATKAV. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02881 139 PANTHER - 32 122 IPR010264 -
Seca11g02881 139 Pfam Plant self-incompatibility protein S1 32 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02881 Seca-Chr11 55348505 55348924 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02881 24 135 Carbohydrate Esterase AT3G16970 33.884 5.34e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02881 - - pvu:PHAVU_004G003500g 95.5153