Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02878 ATGGTTTTCGTTTCAAAAATTGTTTTATTTCTCGGTATGCTGGTAACTATAGTTATTACAATGCAATTCAATGGTTGTAATGCAATTCCATTTCTACCCAAAGTAACCGTTGTAATATACAACGAGTTAAGTAATAATACTGAGTTGTGTCTTCATTGCAAAGACAAGAAACATGATCTTGGATTTCATGTTGTACCCGTTGGAGGATTCTACAGCTTCAGATTTGCGCGAAATCCCTTCATAGCTTCTAAGTTGTATTTTTGTAGATTTAATTGGACAACAGCAGCAAAAGCACACTACTTTGACATCTATGATGAAAAGCGAGATAATTGTGGTAGATGTGTTTGGGATATACTAGAAACAGGACCATGTGAGATTAAGAAGGAGTCACGGGAATGCTTTCAGTGGAACGACAGCGACAAAGGCAGTGTGAATGTGTGA 441 0.3696 MVFVSKIVLFLGMLVTIVITMQFNGCNAIPFLPKVTVVIYNELSNNTELCLHCKDKKHDLGFHVVPVGGFYSFRFARNPFIASKLYFCRFNWTTAAKAHYFDIYDEKRDNCGRCVWDILETGPCEIKKESRECFQWNDSDKGSVNV. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02878 146 PANTHER - 32 127 IPR010264 -
Seca11g02878 146 Pfam Plant self-incompatibility protein S1 36 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02878 Seca-Chr11 55095676 55096116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02878 33 137 Carbohydrate Esterase AT3G16970 41.228 2.89e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02878 - - pvu:PHAVU_004G003500g 117.472