Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02875 ATGGTTTTTGTTTCAAAAATTGGCTTATCTCACTGTATGCTGGTAACTATATTTATTACTTTGCAATTCAATGGTGGTAATGCATGGTCGTTATTTCCTAAAATAACTGTTGAAATAACCAACAAGTTAAGTAATGATTCTGAGTTGGGTCTTCATTGCAAAGACAAGAATTATGATATTGGGTTTCATATTCTACCCGTTGGAGAAATGCACAGCTTCAGATTTCGGCCTAGTATCATCGGTTGTGTTACGTTGTACTTTTGTAGGTTTAATTGGACAACAACAGCAGAACACCACTTTGACATCTATGTTCAAAAGCGAGATTCTTGGGATAAAATATTTTATTGGGAAATACTAGAAACAGGACCATGTAAGATTAATGGTTCACGGCCATGCTTTCAATGGAAAAATGAGACAAAGGCAGCGTGA 429 0.3566 MVFVSKIGLSHCMLVTIFITLQFNGGNAWSLFPKITVEITNKLSNDSELGLHCKDKNYDIGFHILPVGEMHSFRFRPSIIGCVTLYFCRFNWTTTAEHHFDIYVQKRDSWDKIFYWEILETGPCKINGSRPCFQWKNETKAA. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02875 142 PANTHER - 33 127 IPR010264 -
Seca11g02875 142 Pfam Plant self-incompatibility protein S1 36 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02875 Seca-Chr11 54888379 54888807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02875 33 139 Carbohydrate Esterase AT3G16970 39.655 8.78e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02875 - - mtr:25495108 120.168