Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02869 ATGGGTTCTATTGGAACTGAAAGCTTAGGACCAGAGGTTGTGACCGTTGATGTGCTTGCAGCCAAGGGTCTGATCCAGACGAGCCATGTTTATCTAGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATGCAGAGAAGATCATTAACATAGCATACATGTTCAATACACCCCAAGGCAGGGTGAAGAATCCAGAGTTTCTGAACGAGGTTCTGTCTGTTTGCAAGAAAGAAGATCACCTCATCGTGGGTTGCCAAAGTGGAGTGAGGTCTCTGTATGCAACAGCTGATCTTCTGGCTGAAGGCTTTAAGGATGTGAACAACATGGGAGGAGGTTATCTGGACTGGGTTAAAAATGAATTTCCAGTGAAGGCACCTAAAAAGGAACTCTCATCAGTTGTGTGA 411 0.4574 MGSIGTESLGPEVVTVDVLAAKGLIQTSHVYLDVRTVEEFQKGHVDAEKIINIAYMFNTPQGRVKNPEFLNEVLSVCKKEDHLIVGCQSGVRSLYATADLLAEGFKDVNNMGGGYLDWVKNEFPVKAPKKELSSVV. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02869 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 130 IPR044684 GO:0003824
Seca11g02869 136 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Seca11g02869 136 Gene3D - 7 127 IPR036873 -
Seca11g02869 136 CDD RHOD 20 119 - -
Seca11g02869 136 Pfam Rhodanese-like domain 27 120 IPR001763 -
Seca11g02869 136 SMART rhod_4 16 124 IPR001763 -
Seca11g02869 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02869 Seca-Chr11 54643829 54645703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02869 3 134 Sulfurtransferasese or Rhodanese AT5G66170 55.303 3.23e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02869 - K15692 gmx:100792251 232.646