Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02851 ATGCTCTCAGCACCCTTTCTTACAGTACCTTTCACCACCACTGCCTCTTTCTCGGACAAAACCGTCTCTTTGCCGCCGCACCACGTCAGATCCCGGCCAGTACTCTCCTTCGCCACTGCTACCGCCACCGAAGCTAGCTCTACTCGGACGGAGCAGCAACAACCGAGGCCTACGTATCTGAATCCCCACGGCCACATGGCTTCCTGCAAGTCGCTTTACGAAATTCTCGGAATCGCCGCCGCCGCGTCCGACCAGGAAATCAAGGCGGCGTACCGGCGACTAGCCAGGATGTGCCACCCTGACGTGGCGGTGGTCGGTCGGAAGGACTCGTCAGCGGGCGACTTCATGAAGATCCATGCTGCATACTCCACCCTATCGGATCCCGAGAAACGCGCCAGCTACGACAGAAGCTTATTTCAGCGGCGTCGGGAACCGCTGACGACGACGGCGTCGAGATTTTCCGGCTATGCCGGTCGGAAATGGGAAACGGACCAGTGCTGGTAG 504 0.5933 MLSAPFLTVPFTTTASFSDKTVSLPPHHVRSRPVLSFATATATEASSTRTEQQQPRPTYLNPHGHMASCKSLYEILGIAAAASDQEIKAAYRRLARMCHPDVAVVGRKDSSAGDFMKIHAAYSTLSDPEKRASYDRSLFQRRREPLTTTASRFSGYAGRKWETDQCW. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02851 167 MobiDBLite consensus disorder prediction 40 63 - -
Seca11g02851 167 SMART dnaj_3 70 130 IPR001623 -
Seca11g02851 167 Pfam DnaJ domain 72 135 IPR001623 -
Seca11g02851 167 Gene3D DnaJ domain 62 155 IPR036869 -
Seca11g02851 167 ProSiteProfiles dnaJ domain profile. 71 138 IPR001623 -
Seca11g02851 167 SUPERFAMILY Chaperone J-domain 66 141 IPR036869 -
Seca11g02851 167 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 30 167 - -
Seca11g02851 167 PRINTS DnaJ domain signature 73 91 IPR001623 -
Seca11g02851 167 PRINTS DnaJ domain signature 110 130 IPR001623 -
Seca11g02851 167 PRINTS DnaJ domain signature 91 106 IPR001623 -
Seca11g02851 167 CDD DnaJ 73 127 IPR001623 -
Seca11g02851 167 MobiDBLite consensus disorder prediction 40 59 - -
Seca11g02851 167 ProSitePatterns Nt-dnaJ domain signature. 115 134 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02851 Seca-Chr11 53864558 53865061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02851 73 135 C2H2 Transcription Factor Family AT1G74250 43.939 3.47e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02851 - - gmx:100795760 193.356