Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02846 ATGAGGAAAGATGATGTAATTTGGGATGTCAAAGGCAATGCTATTATGCATCCGTATTTATGTAGCAAAGCTGGGTTGAGGGACAAAAAGCATTTTTTGAGGATAGATCGTAAAAAAGAACATAGGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTACGAGTTAGGTATGATTATAAGACTAGGAAATTCAAGGTGGTTTCATTTATTAAGTGTCACAACCATGAGTTAACTCCGACAAAATTTGTCCCTTTAACTCCTTCATATCGTGGCTTGTCTGAAGGGGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGCAGACAATGAACCGGTTTTTTTCTCTAGGTTTCTATGTTCTGATGATGGTAAATTGACCCACTTATTTTGGACTGATAGAATTAGTCGTGCTGATTATCAATTTTTTGGAGATGTGGTTGCTTTTGATGCCACATACAAGAAGAACAAATATAGGTATCCGTTGGTTATATTTTTTGGTAAAAATCACCATTCTCAAACAATTATATTCGCTTGTGCTATAATTGCAGACGAGACCATTCAAACATATAAGTGGGTTCTTGAAATGTTTTTGAAAGCTATGTTTAACAAGCATCCAAGTGCAGTAGTGACTGATGGTGATGGTGCCATGAGGGAGGCCATTAGGCAAGTATTTCCAAATGCATCTCATTGA 855 0.3696 MRKDDVIWDVKGNAIMHPYLCSKAGLRDKKHFLRIDRKKEHRPLTRVNCEAKLRVRYDYKTRKFKVVSFIKCHNHELTPTKFVPLTPSYRGLSEGDKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYNYIDEVKRGKIKDGDAMAALSYLQGKADNEPVFFSRFLCSDDGKLTHLFWTDRISRADYQFFGDVVAFDATYKKNKYRYPLVIFFGKNHHSQTIIFACAIIADETIQTYKWVLEMFLKAMFNKHPSAVVTDGDGAMREAIRQVFPNASH. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02846 284 Pfam FAR1 DNA-binding domain 11 78 IPR004330 -
Seca11g02846 284 PANTHER OS01G0519700 PROTEIN 15 284 - -
Seca11g02846 284 Pfam MULE transposase domain 200 284 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02846 Seca-Chr11 53632330 53633184 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g02846 MULE 2.4e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02846 - - ccaj:109794460 390.193