Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02778 ATGATCTCAGACAAGCCGAATGGATCATCACCGACATTAGAATCATTGCTGACAAGGGAACAAGCCTCCTCGAAGCTTTCTTCATCGCCACCGTACAGCCTCACCAAGGGAACAAGCCTCTCCAATTTCTCCTCAAAGAAGATGCTCGCATGCGTGAGTATCTTCAAGATCATTGATCCCTTGAAAGAAGAGGAAAATGAAATAAAGAGGGTTTTGACTCATAGAGGAAGATACGTGCAATACAATGTGTACGGAACCTTGTTTGAGGTCTCTTCCAAATACGTTCATCCCATTCGCCCTATCGGTAGAGGCGCTTATGGCTTCGTTTGTTCTGCTGTTAATTCAAATACACATGAAGAAGTTGCCATCAAGAAGATTGGTCCCAAGCAATTGAGGTCAAGTGGAGTATTATGCAGGGCTAATTCATTAGCAGAGATCCAGGCTTTGTCCAATCAGCCGTTTAGCTTTTCTGCAGAAACCTACTCTTTCACTCCTAATATTTCAAGAGGCACTTTGTCCACATTGGTAACTCTCTCTATAGCTATTAGAGATTAA 555 0.4288 MISDKPNGSSPTLESLLTREQASSKLSSSPPYSLTKGTSLSNFSSKKMLACVSIFKIIDPLKEEENEIKRVLTHRGRYVQYNVYGTLFEVSSKYVHPIRPIGRGAYGFVCSAVNSNTHEEVAIKKIGPKQLRSSGVLCRANSLAEIQALSNQPFSFSAETYSFTPNISRGTLSTLVTLSIAIRD. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02778 184 MobiDBLite consensus disorder prediction 1 37 - -
Seca11g02778 184 Gene3D Phosphorylase Kinase; domain 1 71 152 - -
Seca11g02778 184 ProSitePatterns Protein kinases ATP-binding region signature. 101 125 IPR017441 GO:0005524
Seca11g02778 184 SUPERFAMILY Protein kinase-like (PK-like) 77 140 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02778 Seca-Chr11 51931276 51935580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02778 65 127 MAP Kinase Gene Family AT4G11330 77.778 2.21e-29 109