Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02773 ATGCGAACGCTTTGTGATGCATGTGAGAGCGCCGCCGCTATCGTTTTTTGCGCCGCCGATGAGGCTGCGCTCTGCCGTGCCTGCGACGAGAAGAATTTAAATTATTGGAGTGAACAGGTTCATATGTGTAATAAGCTAGCTAACCGGCATGTAAGGGTTGGTCTTGCAAGTCCAAGTGATGTGCCTCGCTGTGACATTTGTGAGAATGCACCTGCTTTCTTCTATTGTGAGACAGATGGAAGTTCCCTTTGTTTGCAGTGTGATATGATGGTTCATGTTGGAGGTAAAAGAACGCATGGAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCTGGAGATAAACCTGGTCATGTAGAAAACCCAGCTGAGACTAAAAGAGGACAAAATCCACTGCCCAAAATGAAAATAGGAGAAAAACAAGAAAATCACAGGATGCCTCTGGTTCTGATGCCAGAACCTGACACTGATGGGCATGCCACCAGGGAAACTAAATTGATTGATTTGAACATGAGGCCTCAGAGAATACATGAACAAACACCAAACAATCAGCCATAA 558 0.4462 MRTLCDACESAAAIVFCAADEAALCRACDEKNLNYWSEQVHMCNKLANRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMMVHVGGKRTHGRYLLFRQRVEFPGDKPGHVENPAETKRGQNPLPKMKIGEKQENHRMPLVLMPEPDTDGHATRETKLIDLNMRPQRIHEQTPNNQP. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02773 185 SMART bboxneu5 59 104 IPR000315 GO:0008270
Seca11g02773 185 SMART bboxneu5 1 55 IPR000315 GO:0008270
Seca11g02773 185 ProSiteProfiles Zinc finger B-box type profile. 59 104 IPR000315 GO:0008270
Seca11g02773 185 Gene3D Classic Zinc Finger 2 99 - -
Seca11g02773 185 SUPERFAMILY B-box zinc-binding domain 56 94 - -
Seca11g02773 185 CDD Bbox1_BBX-like 4 55 - -
Seca11g02773 185 Pfam B-box zinc finger 60 98 IPR000315 GO:0008270
Seca11g02773 185 CDD Bbox1_BBX-like 64 104 - -
Seca11g02773 185 FunFam B-box zinc finger protein 19 2 100 - -
Seca11g02773 185 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 146 - -
Seca11g02773 185 ProSiteProfiles Zinc finger B-box type profile. 1 55 IPR000315 GO:0008270
Seca11g02773 185 MobiDBLite consensus disorder prediction 113 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02773 Seca-Chr11 51841278 51844332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02773 1 184 C2C2-CO-like Transcription Factor Family AT2G21320 57.368 3.88e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca11g02773 zf-B_box 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02773 - - gmx:100780544 322.398