Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02746 ATGACGGTGACTGCGGGGAGACGATTCTGCACGCGAGAGAGAGACGGTGGCTGTGCGCGGACGGTGGCTGTGGTAGGGGCACGACGCTCGCACAAGGACGACGGTGGACTGTGGTGGTTGCAGTGGTTCGATTCACACCCTCCTAAGGTTCCAATCTCTGTCCCAGTAGTGAAAGTGGTGCTCTTGTTCCAATTGTTTGAGTACCAAGAACTTGTATCAGCAACATCAAATTTCTTACCTGAAAACTTGATTGGGAAAGGAGGAAGTAGTAAGGTTTATAAAGGATGCCTTCCTGATGGCAAGGAACTTGCTGTTAAGATCCTAAAGCCTTCTGATGATGTTTAG 345 0.4957 MTVTAGRRFCTRERDGGCARTVAVVGARRSHKDDGGLWWLQWFDSHPPKVPISVPVVKVVLLFQLFEYQELVSATSNFLPENLIGKGGSSKVYKGCLPDGKELAVKILKPSDDV. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02746 114 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Seca11g02746 114 PANTHER OS08G0249100 PROTEIN 63 111 IPR046958 -
Seca11g02746 114 Gene3D Phosphorylase Kinase; domain 1 56 114 - -
Seca11g02746 114 SUPERFAMILY Protein kinase-like (PK-like) 59 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02746 Seca-Chr11 50768881 50769414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02746 65 109 Trihelix Transcription Factor Family AT1G68690 62.222 2.15e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02746 - - gmx:100305405 97.0561