Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02738 ATGATCACCCTCTTTCTCATTATCCCACTGACATTATTGCTGCTTGGTTTAGTGTCACGAATCCATGGAAAAAGGGCCCCATATCCACCAGGCCCAAAAGGCTTTCCCGTCATAGGCAACATCAACATGATGGACCAGCTAACACATAGGGGCTTAGCAAACTTAGCAAAGCAATACGGCGCCGTTTTCCACCTACGAATGGGTTTCCTCCACATGGTCACCATTTCAAACGCAGAAGCAGCGCGTCAAGTGCTCCAAGTGCAAGACAACATCTTCTCTAACCGCCCAGCCAACATAGCCATCAAATACCTCACTTACAACCGTTCTGATTTGGTCTTCGCTCATTACGGTTCTTTCTGGCGCCAAATTCGAAAGCTCTGCGTCATGAAACTCTTCAGCCGCAAGCGTCAAGAGACATGGCGTGCCGTTAGAGAAGAAATTGACGCCGTCGTACGCGCCGTCGAGGCTAACGTCGGCAAGCCGGTGAACATTGGGGATTTGGTGATCTCACGAAGAACATCACGGTCTCAATGCAAGGCTCGTGGCGCACTGGATCGTTTCATTGACAAGATCATTGATGAACATATGGAGAAGAAGAAGAGGAGGACGAGTGTGTGCAAATGTGATGATGATAGTGACATGGACATGGTTGATGAGTTGTTAGCTTTCTACAGTGATGAGGCAAAACTGAATAATGATGAATCAGATGATCTGCACAACTCCATCAAACTCAGTAAGGACAACATCAAAGGCATCATTATGGACCTGATGTTCGGAGGGACAGAGACTGTAGCGTTAACGATTGAGTGGGCAATGGCGGACTTGATGAGAAGCCCACAAGACCTAAAGTGTGTGCAACAAGAACTTGTCGCTAAAGTGGGCTTAGACCACCGTGTTGAGGAGCAAGACATCGAAAAACTCACCTACTTGAGATGCGCCATCAAGGAGACATTACGCCTTCACCCACCAATCCCCTTGCTTCTTCACGAGACAGCAGAGAATGCAACAGTGATTGGCTACTTCATCCCTAAGGGTTCACGTGTGATGATCAACGTGTGGGCCATTGCTAGAGACACAAACTGGTGGGAGGAGCCTGAAGCGTTCAAGCCGTCGCGGTTTTTGAACCCGATTGCACCGGATTTCAATGGGAGTAACTTTGAGTTCATTCCATTTGGATCAGGTCGAAGGTCTTGCCCAGGGATGCAGTTGGGCATGTACACACTTGAATTAGCGGTAGCCCACCTACTTCACTACTTCACATGGGAGTTACCAGACGGAATGAAGCCTAGTGAAATGAACATGCATGATGTGAACGGACTTAGTGCTGCTATGGCAAATCGACTTGTCGCCATTCCTACTAAGCGTGTGATATGTCCTCTTTAA 1383 0.4801 MITLFLIIPLTLLLLGLVSRIHGKRAPYPPGPKGFPVIGNINMMDQLTHRGLANLAKQYGAVFHLRMGFLHMVTISNAEAARQVLQVQDNIFSNRPANIAIKYLTYNRSDLVFAHYGSFWRQIRKLCVMKLFSRKRQETWRAVREEIDAVVRAVEANVGKPVNIGDLVISRRTSRSQCKARGALDRFIDKIIDEHMEKKKRRTSVCKCDDDSDMDMVDELLAFYSDEAKLNNDESDDLHNSIKLSKDNIKGIIMDLMFGGTETVALTIEWAMADLMRSPQDLKCVQQELVAKVGLDHRVEEQDIEKLTYLRCAIKETLRLHPPIPLLLHETAENATVIGYFIPKGSRVMINVWAIARDTNWWEEPEAFKPSRFLNPIAPDFNGSNFEFIPFGSGRRSCPGMQLGMYTLELAVAHLLHYFTWELPDGMKPSEMNMHDVNGLSAAMANRLVAIPTKRVICPL. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02738 460 SUPERFAMILY Cytochrome P450 29 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS P450 superfamily signature 389 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS P450 superfamily signature 312 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 Pfam Cytochrome P450 29 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 Pfam Cytochrome P450 179 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 391 400 IPR017972 GO:0005506|GO:0016705
Seca11g02738 460 PRINTS E-class P450 group I signature 311 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 351 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 248 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 268 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 FunFam Predicted protein 257 450 - -
Seca11g02738 460 Gene3D Cytochrome P450 22 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 Gene3D Cytochrome P450 172 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02738 460 PANTHER CYTOCHROME P450 84A1-RELATED 179 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02738 Seca-Chr11 49989570 49995586 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02738 35 460 Monolignol Biosynthesis Gene Families AT4G36220 60.924 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02738 K09755 - gmx:100793538 640.958