Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02721 ATGGACATTGGTGGGGAAGTAGAAAAGACCGTACGAGAGTTGAGGCAATACTTCAGAACTGGAAAAACCAGGAGTGTTACATGGAGGAAAAACCAGCTCAAAGCTCTTATAGACTTTGTTCATCAAAATGAAGATGCTATATCTAAGGTTCTTCACCAAGATCTTGGGAAGCACCCTGTTGAAGCTTACCGTGATGAGATTGGAGCGGTAGACAAATCAGCCAGCAACGCTTTGAGCTGTGTTGAAAAATGGATGGCCCCTAAAAAGAGTCATATCCCTTTGCTTTTCTTCCCAGCAAAAGGAGAACTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACATGCCTATCATGCTGGCCTTGGATCCATTAATTGGGGCAATATCTGCTGGAAATGTTGTACTCATAAAACCATCAGATCTAGCTCCAGCATCCTCTTCTTTTCTTGCCAATACCCTTCCTCATTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGTGGAGCTGATGTCTGTGAACAACTACTGCTACAGAAATGGGACAAAATATTTTTCACTGGAAGTCAACGCGTTGCAAGAATGGTCATGTCAGCTGCTGCAAAGAATTTAACTCCTGTTACTCTAGAGCTGGGTGGAAAATGCCCTGCTATACTTGATTCTCTTCCCAATCCCTCAGATTTTAAGTTTGCAGTCAAAAGAATCGTAGGAGCAAAGTGGGGATGTTGTAACGGACAGGCATGTATAACAGTCGACTATGTGCTTGTTGAGGAGCAGTTCTCATCTAATCTGATAGAACTATTAAAGAAATTCATCAGAAAATTTTACGGTGACAACCTAGCAGAGTCAAAGGCAATTTCAAGAATTATAAACAAGCAGCACTTTGAGAGATTATGCAATTTTCTTAAAGACCCTCTCGTTGCAGCTTCCATCGTCCATGGTGGTTCAGTCGATGAAGAAAACCTGTAA 978 0.4192 MDIGGEVEKTVRELRQYFRTGKTRSVTWRKNQLKALIDFVHQNEDAISKVLHQDLGKHPVEAYRDEIGAVDKSASNALSCVEKWMAPKKSHIPLLFFPAKGELLSEPLGVVLIFSSWNMPIMLALDPLIGAISAGNVVLIKPSDLAPASSSFLANTLPHYLDSNAIKVIEGGADVCEQLLLQKWDKIFFTGSQRVARMVMSAAAKNLTPVTLELGGKCPAILDSLPNPSDFKFAVKRIVGAKWGCCNGQACITVDYVLVEEQFSSNLIELLKKFIRKFYGDNLAESKAISRIINKQHFERLCNFLKDPLVAASIVHGGSVDEENL. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02721 325 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 324 IPR016163 GO:0016620
Seca11g02721 325 FunFam Aldehyde dehydrogenase 15 219 - -
Seca11g02721 325 Pfam Aldehyde dehydrogenase family 6 320 IPR015590 GO:0016491
Seca11g02721 325 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 215 IPR016162 GO:0016491
Seca11g02721 325 PANTHER ALDEHYDE DEHYDROGENASE 6 324 IPR012394 GO:0006081
Seca11g02721 325 SUPERFAMILY ALDH-like 6 323 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02721 Seca-Chr11 49590111 49594454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02721 7 325 Aldehyde Dehydrogenase Gene Family AT4G36250 57.994 1.63e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02721 K00128 - gmx:100808513 559.296