Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02681 ATGGGAGGCGTTCGAGTAATCTCCACGAATACAATCCAGGCACCGAGTCACAATAACAGTAGTGACTCAACTCTAAAAAATATTCATTTAACCCCATGGGATCTCCAATTCCTCCCACTCGAAACCATCCAAAAAGGCCTTCTTTTTCACCACCCCTTAGTAGAAGACACAATCCACCACTTGAAACATTCATTCTCCTCCACCCTTGCCTTCTTCCCTCCTCTTGCTGGCCGTCTCATAATTACACACCACAAAGACAACACTGCCTCCTCTTTCATTTCTTGCAACAATGAAGGTGCACTCTTTCTCCATGCAGCAGCACACAACACTAGTGTTGCCGACATCCTTCAACCCAACTACGTTCCTCCCATTGTCCATTCTTTCTTCCCACTTAACGGCGTTAAAAACTACCAAGGCACGTCACAGCCGTTACTAGCAGTACAGGTGACGGAGCTACTTGACGGCATCTTCATCGGCTGCACAATCAACCACGCCGTTGCAGACGGCAAGTCGTTTTGGCTTTTCATCAATTCATGGGCTGAAATCTCACGTCGTAAAGGTAACTGCTTTAATCTTAAACCTTCGAAACTCCCTCTATTTGAACGCTGGTTCATGGACGGCATTGACCGTCCAATACGGTTTCACTTTCCGGAGGCAGAGGAGAAGCAGAACCCTCAAAGTGAAAGCCTTAACCCATTATCTGAGAGGATCTTTCACTTCTCAAAGGAGAAAATCGCACAACTCAAAGCTAAAGCAAACAGAGAGGCGAACACTGACAGAATATCTTCTTTGCAAGCGGTTTTAACTCACCTTTGGCTCTGTGTGACTCGTTGCAAACGACTTGACCCACAAGAAGAGGTTCGTTATGGCTTGTTGATAGGAGTTAGACCCAGGATGGTTCCGCCTCTGGAAGAGGGTTATTTTGGAAACGCTGCGCTGGTATGTTGTGTGACAATGAAAGCAGGGGAACTATTGGAGGGTGGCATTGGGAAGGGTTCTTTGGAGATGAACAAGATGATTGCTTTGTACTCTAATGAGAAGGTGAAGAATGAATATGAGTCTTGGGTGAGAACCCCGATGATGTTTTCGATGGATAGCATGATTGGTGGTAATTTCTTGGGCACTAGCAGTTCCCCAAGGTTCAATTTTTATGGGAATGATTTTGGTTGGGGGAAGCCTGTCGCGGTTAGAAGTGGCGGTGCAAATAAAAGAGAGGGAAAGATTACTGTGTTTGCTGGGGCAGAAGAAGGTAGCATTGACATTGAAGTGTGCCTTCCTTATGAGATTTTGGAGGCTATGAGAAATGATAATGACTTCACCAATGTCATTTCCAACTAA 1338 0.4552 MGGVRVISTNTIQAPSHNNSSDSTLKNIHLTPWDLQFLPLETIQKGLLFHHPLVEDTIHHLKHSFSSTLAFFPPLAGRLIITHHKDNTASSFISCNNEGALFLHAAAHNTSVADILQPNYVPPIVHSFFPLNGVKNYQGTSQPLLAVQVTELLDGIFIGCTINHAVADGKSFWLFINSWAEISRRKGNCFNLKPSKLPLFERWFMDGIDRPIRFHFPEAEEKQNPQSESLNPLSERIFHFSKEKIAQLKAKANREANTDRISSLQAVLTHLWLCVTRCKRLDPQEEVRYGLLIGVRPRMVPPLEEGYFGNAALVCCVTMKAGELLEGGIGKGSLEMNKMIALYSNEKVKNEYESWVRTPMMFSMDSMIGGNFLGTSSSPRFNFYGNDFGWGKPVAVRSGGANKREGKITVFAGAEEGSIDIEVCLPYEILEAMRNDNDFTNVISN. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02681 445 Gene3D - 220 435 IPR023213 -
Seca11g02681 445 Pfam Transferase family 5 438 - -
Seca11g02681 445 Gene3D - 4 219 IPR023213 -
Seca11g02681 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02681 Seca-Chr11 48060325 48061662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02681 61 428 Monolignol Biosynthesis Gene Families AT5G48930 25.128 3.46e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02681 - - gmx:100500257 579.326