Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02675 ATGGAGTTTGGCGGTTTCAATGTTCAGCATCAGCTTCAAGAAGAGTCTGCTCAGTGCATAAATTCAGCCACTCCACCTTGGCATAAGCCTTTCACTAGTCAATCATGGATCCCAAGCAACATATACAGCAATGGGTTTGTGACTGAGAGCTTTACAAATTCAAGAGAATTACAAGGGCACAAGTATGCCATGATTGATTCAATTAGAACTTCAACAGGGCAATTAGCAGCCTTTGGTTTTCAAGATGGACATCCAAGAATCAAAGGGGAAGATGATCTGTCTAATGATTTTTTACCAAAACTAAGTCAAATAATGAACAGTTCCTCAAAGGTTAATGTGGATCAGTCAAGTTCACTAATCTCAATCCGTGATTCTCCTAGCTTCTTCTCTAGAACTGGAAAAGAGTACTTTTTGCCTGCTGCAGAGAATCTCTGTCACATTGATGGAGGAATGCCTCTTAATAACATGAGATCATATAACTTTGGCGGCGTTTCTTCAAATTTACCATCCCATGTGACCTCTTCTTTGGACTTAAATTCTCAAATGTTAGATTTGTCTACAACTAATTGTGGCCTGCAACTTTCCTATGATACTTTTGGTCTTAATCAGGAGACCTTATCTTTAAGCCACGCCAACAACAACATGCATGGTCGCCAAAATAGTCCATCAAATAAAATTCCATCATTCATGAGTGAAGTTACAATGACGAAAAGGCCTAGCAATTGCTCTCAAGTACCAAGAGAATGTGAAGCAAAAGCTAAGAAATCAAGACCTTCATGCCCGCCCCTGAAGGTCAGAAAGGAAAAATTGGGGGACAGGATTCAAACTCTTCAGAGGTTAGTGGCTCCTTTTGGGAAGACAAGTACAGTCGCTGTATTAAGTGAAGCAATTGGCTATATCCACTTCCTTCATGAACAAATCCAGACTTTGAGCATTCCTTATATGAAGTCGGCGCAAAGCAAACCCGCTAGAATGATGCAGCTGGGATCAGGAAAGGTAGATAGCAGGGAATTCAAGCCAGACCTTAGAAGCAGAGGCTTGTGTCTTGTGCCCCTTTCTTATGCGTCATTTATTCATCGTTGTGATTAG 1089 0.4096 MEFGGFNVQHQLQEESAQCINSATPPWHKPFTSQSWIPSNIYSNGFVTESFTNSRELQGHKYAMIDSIRTSTGQLAAFGFQDGHPRIKGEDDLSNDFLPKLSQIMNSSSKVNVDQSSSLISIRDSPSFFSRTGKEYFLPAAENLCHIDGGMPLNNMRSYNFGGVSSNLPSHVTSSLDLNSQMLDLSTTNCGLQLSYDTFGLNQETLSLSHANNNMHGRQNSPSNKIPSFMSEVTMTKRPSNCSQVPRECEAKAKKSRPSCPPLKVRKEKLGDRIQTLQRLVAPFGKTSTVAVLSEAIGYIHFLHEQIQTLSIPYMKSAQSKPARMMQLGSGKVDSREFKPDLRSRGLCLVPLSYASFIHRCD. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02675 362 Gene3D - 264 325 IPR036638 GO:0046983
Seca11g02675 362 CDD bHLH_AtbHLH_like 264 311 IPR045239 -
Seca11g02675 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 303 IPR011598 GO:0046983
Seca11g02675 362 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 112 356 - -
Seca11g02675 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 316 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02675 Seca-Chr11 48016451 48020135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02675 236 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 56.098 1.44e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02675 - - gmx:100785177 370.163