Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02651 ATGAAGAAAGTTGACTTTATGGGTTTAACTGAAGATGTCATGAGGATGTATCATTTTCGCACTCGTGTGGTGGCATTCAACTTCTACAATACTTATGCTGAAAAGAAAGGATTTGCAGGCAGAAGGTCTAATATTGTTTTAAATAAGAGACGCGAGGTCACTCAACAAACATTTGTCTGCTTCAAGCAAGGATATCGTGAGAAGAAACATTTGGAGAGGCGTATACGAAAAAGGGAACCGAGGTCAATGACTCGGTGTGGTTGTTTTGCTTTCTTTCGAGTAAGGTTTGTAGCAGATATTGGGCGTTGGCATGTAAAAGCAGTTTGTGATGAACACAACCATGAAATGTTGGCGCACAGATTTGTTGGAATGTTGTCTGCACATCGAAAGATGGATGATTGTGAAGTAATGCAGATGAATAGTATGAGAGATGTTGGTATTGGAGTGACCCAGATTTATGGTTTAGCTGCAAACCAATCTGGTGGTTTTGAGAGGCTGGGGTTTAGGAAAAGAGATATGTATAATGAAGTAGAAAAACAAAGGCGTATGCAAGTTAGTGATGTCAGATCTGCTTTTGCTTATCTCCGAGAACTGCGATCAGGTGACCCCGACATGTTTTGGAGACGCACTATTGATGGAGAAGGTAGACTTGAGCATTTATTTTGGTGTGATGGTAGGAGTCGGGAAGATTACAATGTTTTTGGTGAATAG 711 0.4065 MKKVDFMGLTEDVMRMYHFRTRVVAFNFYNTYAEKKGFAGRRSNIVLNKRREVTQQTFVCFKQGYREKKHLERRIRKREPRSMTRCGCFAFFRVRFVADIGRWHVKAVCDEHNHEMLAHRFVGMLSAHRKMDDCEVMQMNSMRDVGIGVTQIYGLAANQSGGFERLGFRKRDMYNEVEKQRRMQVSDVRSAFAYLRELRSGDPDMFWRRTIDGEGRLEHLFWCDGRSREDYNVFGE. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02651 236 PANTHER OS01G0519700 PROTEIN 19 236 - -
Seca11g02651 236 Pfam FAR1 DNA-binding domain 27 117 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02651 Seca-Chr11 47527016 47527726 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g02651 FAR1 7.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02651 - - tpra:123915148 248.44