Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02598 ATGTCTGACTCATCACACCTGACTTTCTGTTTTCTTTCTTCCATTCTTGCTCTTATTGTAATCTTCATTTTCAACAAAAGAAAGAAAACAAGGCTTAATCTTCCCCCTGGCAAAATGGGGTGGCCTTTTCTAGGGGAAACCATTGGATATTTGAAGCCTTACTCTGCTACCACAATAGGAGAATTTATGGAGAACCACATAGCAAGGTATGGTACAATTTACAAGTCAAACTTGTTTGGTGAGCCAGCTATAGTCTCAGCAGATGCAGAGCTGAATAGGTTCATATTACAGAACGAAGGGAAGTTGTTTGAGTGCAGCTATCCTAGAAGCATTGGAGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGTGACATGCATAGAGACATGAGGAATATATCACTTAACTTTATGAGCTATGCAAGACTCAGAACAAATCTATTGAAAGAGATGGAGAAGCAGATCCTTCTAGTTCTAAACTCGTGGAAAGAAAATTGCACATTCTCAGCACTAGATGAAGCAAAGAAGTTCACTTTCAATTTGATGGCTAAGCATATCATGAGCTTGGATCCTGGGAATCTAGAGACAGAACAACTGAAAAAAGAGTATGTGTATTTCATGAAAGGTGTGGTATCTGCGCCTTTGAATTTGCCCGGAACTGCATATAGGAAAGCATTGAAGTCTAGGTCCACTATACTGAAGTTTATAGAGGGGAGAATGGAAGGAAGAATGAAGAGAAGCCAAGAGAGAAATGAAAGATTGGAGGAAGATGATCTTCTAAACTGGGTTCTGATGCATTCAAATCTTTCAAATGAGCAAATTCTTGACTTGATTCTGAGCTTGCTTTTTGCTGGCCATGAAACTTCATCAGTAGCTATAGCTCTAGCTATTTACTTCTTGGCGGGTTGTCCTCAAGCTATACAACAATTAAGGGAAGAACACAGAGAAATAGTCAGATCCAAGAAACAAGCAGGGGAGGTTGAATTAACTTGGGATGATTATAAAAGAATGGAATTTACTCATTGTGTTGTGAACGAAACACTTCGGCTGGGAAATGTAGTGAGGTTCCTTCACAGGAAGGCTCTCAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCGGTGATTTCAGCGGTGCATCTGGATCCTGCACTTTTTGACCAACCTCAACATTTCAATCCATGGAGATGGCAGGTCAGTTCTACTTATAACCATAGAAAAAAAAATGCACGCCTTTTGGAGGAGCAGAGCAATAGTAAAAGTGGAAGTTGGCAAAACACAAGCAATAACTTCATGCCGTTCGGGGGAGGACCAAGGCTGTGTGCGGGATCAGAGTTAGCTAAACTTGAAATGGCAGTTTTCATCCACCATCTTATTCTCAACTACAACTGGGAACTGGTCGATGCTGATCAACCTGTTGCATACCCTTTTGTTGATTTTCCCAAAGGTCTATCCATCACAGTCCAAAAAGCCACCCACTCTTTGATATGA 1512 0.4094 MSDSSHLTFCFLSSILALIVIFIFNKRKKTRLNLPPGKMGWPFLGETIGYLKPYSATTIGEFMENHIARYGTIYKSNLFGEPAIVSADAELNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLRTNLLKEMEKQILLVLNSWKENCTFSALDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYVYFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGRMEGRMKRSQERNERLEEDDLLNWVLMHSNLSNEQILDLILSLLFAGHETSSVAIALAIYFLAGCPQAIQQLREEHREIVRSKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPRGWKVLPVISAVHLDPALFDQPQHFNPWRWQVSSTYNHRKKNARLLEEQSNSKSGSWQNTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNYNWELVDADQPVAYPFVDFPKGLSITVQKATHSLI. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02598 503 PRINTS E-class P450 group IV signature 448 466 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS E-class P450 group IV signature 338 354 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS E-class P450 group IV signature 432 448 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 CDD CYP90-like 66 497 - -
Seca11g02598 503 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 SUPERFAMILY Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Seca11g02598 503 PANTHER CYTOCHROME P450 26 30 479 - -
Seca11g02598 503 Coils Coil 238 258 - -
Seca11g02598 503 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g02598 503 FunFam Cytochrome P450 90B1 24 497 - -
Seca11g02598 503 Pfam Cytochrome P450 35 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02598 Seca-Chr11 45100789 45106079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02598 26 405 Cytochrome P450 AT3G50660 74.065 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02598 K09587 - gmx:100802498 801.586