Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02592 ATGTCTTCCCCTCATAACTCTTCTCCTGATGATGCCTCACCCGATGACTCCACTCCTGATAACTCCTCACCCGATAACTCAACACCCGATAATTCCGTACCTGATAAATCAGCCCCTCATAACTCTACACCCGATAACTCCACGCCTGATAATTCCACACCTGATAATTCCACGCCTGATAACTCAAATGCATCACATAAAAGTTCATCATCCTCTCCAGTGCTGGATCAATCTCCAACACCACCAAATTCATCACATAAATCATTGTCAAATAATGGCAAGGATATTGACACCAAGGCAATAGTTGGAGGTGCGGTTGGAGCAGGGTTCGTCATTCTTATCCTAGTTATTGTTTGTTTCATTTGCTCCAGGAAGAAGAAACAAAAGCAAAAGTACTATTATGGAGGCCCTTCCCTTGGAAAAGTAACATGCACAGGGAGCAACTATTACAATAGCGGACAACACCCTCACCCTAATTGGCAATCAGGTCCGGGTCCAAATGGGGCAGACCATGTTGTGAGGATGCAATCACCTAATGGAATGGGTCCTCCTAGTGGTGTTTGGGGTGCACCACATCCTCTAATGAATAGTGGTGACATGAGCGGCAATTACTCAATGGGGATGGGACCAAACTCTCTACCACCTCCCTCTCCAGGCCTCTCTCTTACACTCAAGGGTGGTACCTTCACATATGAGGAATTGGCATCTGCCACCAAAGGATTTGCTAATGAAAACATTATAGGACAAGGTGGCTTTGGTTATGTCCATAAAGGAATATTGCCTAATGGAAAGGAAGTGGCAGTTAAGAGTCTAAAATCAGGTAGCGGACAAGGAGAACGGGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGTATTTATGGCGGGCAGAGAATGTTGGTCTATGAATTTGTTCCCAATCAAACTTTAGAACATCACCTTCATGGAAAGGGTGTGCCTACCATGGATTGGCCTACTAGAATGAAAATTGCACTAGGATCCGCCAAAGGGCTTGCCTACCTTCATGAAGATTGCAGTCCTCGCATAATCCACCGTGATATTAAAGCTTCTAATGTCCTCATTGATAATAGCTTCGAAGCTAAGGTATCTGATTTTGGATTGGCTAAGTTAACTACTGACAATAATACACATGTCTCAACTCGCGTCATGGGAACATTCGGGTACTTGGCTCCAGAATATGCATCAAGTGGAAAATTGTCAGAGAAATCTGATGTTTTTTCATTTGGGGTAATGCTATTGGAACTGATAACTGGGAAGAGACCTTTGGATTTATCAAAGGCCATGGATGAAAGCTTAGTGGACTGGGCTCGACCACTTCTAAACCAAGGGCTGGAGGAAAATGGGAACTTTGGAGAGTTGGTGGATCCATTTTTGGAGGGAAACTACAATAGTCAAGAAATGACAAGAATGGCAGCCTGTGCTGCTGCAAGCATTCGTCATTCTGCCAAGAAGCGTTCAAAAATGAGCCAGATAGTAAGAGCATTGGAAGGAGATGTTTCACTGGAAGACTTGAAAGAGGGGATGATGAAGCCTTCAGGGAATAGTAGTGTTTACACCTCATCATCAGGGGGCTCAGATTATGATACTATGCAGTACAATGCTGATATGATAAAATTCAGAAAGGCAATAATGTCAAGCCAAGAATTCAGTGATAGCAGTGAGCTCTCGAGTAGAGAGATGGGCCATCATTAG 1749 0.4374 MSSPHNSSPDDASPDDSTPDNSSPDNSTPDNSVPDKSAPHNSTPDNSTPDNSTPDNSTPDNSNASHKSSSSSPVLDQSPTPPNSSHKSLSNNGKDIDTKAIVGGAVGAGFVILILVIVCFICSRKKKQKQKYYYGGPSLGKVTCTGSNYYNSGQHPHPNWQSGPGPNGADHVVRMQSPNGMGPPSGVWGAPHPLMNSGDMSGNYSMGMGPNSLPPPSPGLSLTLKGGTFTYEELASATKGFANENIIGQGGFGYVHKGILPNGKEVAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCIYGGQRMLVYEFVPNQTLEHHLHGKGVPTMDWPTRMKIALGSAKGLAYLHEDCSPRIIHRDIKASNVLIDNSFEAKVSDFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGKRPLDLSKAMDESLVDWARPLLNQGLEENGNFGELVDPFLEGNYNSQEMTRMAACAAASIRHSAKKRSKMSQIVRALEGDVSLEDLKEGMMKPSGNSSVYTSSSGGSDYDTMQYNADMIKFRKAIMSSQEFSDSSELSSREMGHH. 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02592 582 MobiDBLite consensus disorder prediction 1 93 - -
Seca11g02592 582 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 107 563 IPR047117 -
Seca11g02592 582 SMART serkin_6 241 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g02592 582 SUPERFAMILY Protein kinase-like (PK-like) 217 514 IPR011009 -
Seca11g02592 582 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Seca11g02592 582 FunFam proline-rich receptor-like protein kinase PERK1 219 316 - -
Seca11g02592 582 FunFam Proline-rich receptor-like protein kinase PERK1 317 525 - -
Seca11g02592 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Seca11g02592 582 Gene3D Transferase(Phosphotransferase) domain 1 317 528 - -
Seca11g02592 582 ProSiteProfiles Protein kinase domain profile. 241 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g02592 582 Pfam Protein tyrosine and serine/threonine kinase 244 442 IPR001245 GO:0004672|GO:0006468
Seca11g02592 582 Gene3D Phosphorylase Kinase; domain 1 221 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02592 Seca-Chr11 44616792 44621281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02592 90 571 Trihelix Transcription Factor Family AT1G70460 50.513 4.54e-152 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Seca11g02592 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02592 - - gmx:100805872 788.489