Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02529 ATGAATATTGATGGTAAAGAACCCCAAAAATCCAATTCCCCCAATAATCATAATGTTGAAACTGATAAGATTGTTGATGGTTACAAAAAGATATCTGAATTAACAGGTGAGGATATTAGAAGGCTTGAGTTTGATTCTGAAGAGGATGCATATGTTTTCTTCCATGAGTATGCAAAATTCATAGGGTTTGCCGTTAGGAAACATGATGTGTATAGAGATCGTAATGATGTAATTACAATGAGACAATTGGTATGTAACAAGGAGAGAGAGAGAAGTGGGAAGCATCTTAATAAGACTTATAGAAAGAGGGAGGCAAAGGCCATTACACGAACAAAATGTAATGCAAGACTCCGAATTCATTTAGATTATAAGAGTGGGAAGTGGAGGGTTGGTTGTTTTGAGCCAATTCACAACCATGAATTGACTCCTGCGAGTATGGAACATTTGCTACCAACTTATTGTGGGTTGAGTGTAGTTGATAAGGCACAAGTTGATGGTCTTCATTTGTATGGTGTTAGGACTTGCCATATTATGGGTCTTATAATGGGTCAGAAGGGGGATTATTCAGATCTTGGATTCTGTAAGAAAAAATTGTACAATCACATTGATAAGGTGAACAGGGCAAAAATTGAGGATGGTGATGCTTTTGCAGCCTTGTGTTACCTTCAGGCAAAGTATGATAACAATCCAATGACATTTGTAAAGTTTACAACCACTGAAGATGATAGACTTGAAAACTTGTTTTGGGTTGATGTAGATAGTAATATTTGTTTTGGGGATGTAGTTGCTTTTGGCACCATATACAAGAAAAATAAGTATAACAGACCTTTAGTAATTTTTTGTGGTTATAACCATCATGGTGTGAAACCATTATTTTTGGTTGTGCTCTTATTGCTGATGAGAAGACTGAAACACATAAATGGGTCCTTGAAACATTTCTTGAAGCGATGTGTAATAAAGTTCCTAAGGTTGTGGTTACTGATGGAGATGGTGCAATGCGTGAAGCTATTAGGGTTGTTTTCCCTGGTACTCTTCATAGGCTTTGTGCATGGCACCTTCATCAAATGCTTGTGA 1074 0.3687 MNIDGKEPQKSNSPNNHNVETDKIVDGYKKISELTGEDIRRLEFDSEEDAYVFFHEYAKFIGFAVRKHDVYRDRNDVITMRQLVCNKERERSGKHLNKTYRKREAKAITRTKCNARLRIHLDYKSGKWRVGCFEPIHNHELTPASMEHLLPTYCGLSVVDKAQVDGLHLYGVRTCHIMGLIMGQKGDYSDLGFCKKKLYNHIDKVNRAKIEDGDAFAALCYLQAKYDNNPMTFVKFTTTEDDRLENLFWVDVDSNICFGDVVAFGTIYKKNKYNRPLVIFCGYNHHGVKPLFLVVLLLLMRRLKHINGSLKHFLKRCVIKFLRLWLLMEMVQCVKLLGLFSLVLFIGFVHGTFIKCL. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02529 357 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g02529 357 MobiDBLite consensus disorder prediction 1 22 - -
Seca11g02529 357 PANTHER OS01G0519700 PROTEIN 41 263 - -
Seca11g02529 357 Pfam FAR1 DNA-binding domain 53 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02529 Seca-Chr11 42187779 42188852 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g02529 FAR1 8.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02529 - - ccaj:109792835 303.138