Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02462 TTTAATATTGGAAGATTTGGTCATCCATACGTCTTGAAACCCCTTGGTGAAGCAGATGCTGTAAATCTATTTCACCACTCAGCATCCCTGAAACAGAGCAGCACTGATATTCCTGATCGTGTTGTCAAAGAGATAGTCAGAGGCTGCAGTGGTTCTCCCTTGGCACTTAGAGTGAGTGGCAGATCACTCAGTCACCAGCAGCCATTGGTTTGGCACAACATGGCGAGGGCATTGTCCAAGGGTCATTCAATTCTTGATTCTAACAATGATGTACTTGTTTCTCTCCAAAAAAGCTTAGATGTATTGGATCATAAGGCCATAGAGTGTTTTGGGGACCTAGGCTTATTTCCTGAAGATCAGAGGATCCCTGCTGCTGCCCTTGTTGATATGTGGTCAGAACTGCATAATGAAGATGATGCCAGTGCGATGGGGAATATTTATGATCTGGTCAACTTGAACATGGCTGATATTTTTGTGACAAGGAAAGTTGCAAGTGACACGGTTGAGTACAATTACCACTATGTCACATTGCATGGTCTTCTTCGGGAGCTAGCCATCCATCACATAAGCCAGGATCCAGTGGATAAGAGGAATAGACTAATTATTGACATAAGTGGAAATAATCTTCCAACATGGTGGACCACAGAGAATGAGTATCACATTGCAGCCCGCATATTATCCATATCAACTGATGAAGCGTTCAATTCAGAATGGTGCAACTTGCAGCCAACTGAAGTTGAGGCTCTAGTTTTGAACCTTAGAGAAAAGAAGTGCAGATTACCAATGTTCATGAAGAAAATGAATAAATTAAAAGTTTTGATAATCACAAATTATGACTTCTATCCTGCTGACCTAGAGAATTTCGAGATCCTTGATCATCTATCTGATCTTAAACGAATCAGATTAGAGAAGGTTTCAATTCCCTTACTCAGCAAGACCAGGGTGCAATTGAAGAATCTGCAGAAGTGTTCTTTCTTTATGTGCAATGTGAGTGAAGCATTTAAGAATTGCAATATCCAAGTTTCAGATATGCTGCCAAATTTGGTGGAGTTGAACTTTGACTACTGCAATATGGTGGAATTGCCAGATGTGCTCTCTAACATTGTTTCCTTAAAGAAGCTCAGCATTACAAATTGCCATAAGCTTTCTGCACTTCCTAAAGGAATTGGAAATTTGGTCAATTTGGAATCAATGAGGCTTAGTTCCTGCACTGGTTTAGAAGAGTTGCCAGATTCAATCACAAGCCTTCATAACCTAAAATTTCTTGACATCTCTGACTGCATAAGCCTTAGTAACTTACCTGAGAATATTGGAGAGCTAGTTAAATTAGAAAAGCTCAATGTGAGAGGATGCTCGAGATTAAGCGAGTTGCCAACCTCAATCATGGACCTTCTGAGCTTAAGGAATGTGGTATGTGATGAAGAGACAGCTTTATTATGGGAACCTTTCACAACCATCCTTAATGATCTAAGGCTAGAAGTGGCTCAAGCTGATTTCAATTTAGATTTTCTTCATAGTTTGCAGTCGCGATACTAG 1536 0.403 FNIGRFGHPYVLKPLGEADAVNLFHHSASLKQSSTDIPDRVVKEIVRGCSGSPLALRVSGRSLSHQQPLVWHNMARALSKGHSILDSNNDVLVSLQKSLDVLDHKAIECFGDLGLFPEDQRIPAAALVDMWSELHNEDDASAMGNIYDLVNLNMADIFVTRKVASDTVEYNYHYVTLHGLLRELAIHHISQDPVDKRNRLIIDISGNNLPTWWTTENEYHIAARILSISTDEAFNSEWCNLQPTEVEALVLNLREKKCRLPMFMKKMNKLKVLIITNYDFYPADLENFEILDHLSDLKRIRLEKVSIPLLSKTRVQLKNLQKCSFFMCNVSEAFKNCNIQVSDMLPNLVELNFDYCNMVELPDVLSNIVSLKKLSITNCHKLSALPKGIGNLVNLESMRLSSCTGLEELPDSITSLHNLKFLDISDCISLSNLPENIGELVKLEKLNVRGCSRLSELPTSIMDLLSLRNVVCDEETALLWEPFTTILNDLRLEVAQADFNLDFLHSLQSRY. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02462 511 Gene3D Ribonuclease Inhibitor 201 477 IPR032675 -
Seca11g02462 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 112 IPR027417 -
Seca11g02462 511 SUPERFAMILY L domain-like 202 471 - -
Seca11g02462 511 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 6 504 IPR039203 GO:0050832
Seca11g02462 511 PRINTS Disease resistance protein signature 49 63 - -
Seca11g02462 511 PRINTS Disease resistance protein signature 414 430 - -
Seca11g02462 511 Gene3D - 98 187 IPR036388 -
Seca11g02462 511 Gene3D - 15 97 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02462 Seca-Chr11 39935002 39937395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02462 294 468 WRKY Transcription Factor Family AT4G12020 31.285 2.12e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02462 - - gmx:100812310 711.449