Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02459 ATGGCTATGATTGTAGATGCTGCTCTTGGGCATGTGGTTAATGAACTGCTGACTTCAGTTTCGAAAATGAAGAACAAGGCTGTTAAGTTCAAACCCACTCTGGAAAAAATCGAGAAGACCCTCGAATCAATAGGACCACTGGTTAATCAGATAGAAGAACTTAACAAGAGATTGGATCGGTCACCACCAGAGGAAATTGTTAGGCTGATCAATCATATGAGAAGTGGCAAGGAGCTTGTTCTCAAGTGTTCTAAAGTTCAGTGGTGGAACTGCTGCTATAAGGCCAATTACCAAGAGGAACTTCAAGCATTTGATGAAGAAATCAATAGGTTCTTTCAGATAAATATGCTATTGCAGGTCCTTGCGGTGATTATAAAGTTTCATGCTGAATTTAGAAATGCTGATCTGAGAAATGAAAGGATTGAATTATGGGGTGTATGCTCGCCTCCCAAACCCCCTGATTTTACTGTTGGCTTTGATGTTCCCCTGAATAAGTTGAAGGACAAGTTGCTCCGTTACGAGCTTAGTGTCTCAGTGCTCACTGTTACTGGTTTACCAGGTTCCGGGAAGACAACATTAGCCCAAAAGTTTTGTTGGGATGATCAAGTCAAAGGTAAATTCAAGGAGAATATCTTCTTCGTCACCTTTACGAAAACGCCCCAGTTGAATTCCATAGTGTGGAAACTGTATGAACACACTGGTCAGCTGCTGTCGCCTAAGATTCGAACTGATGAAGATGCTGTTACCTATTTGAAACATCTGCTGGAACAGATTGGGAGGAAGGGTTGCCCAATACTGTTGGTGCTGGATGATGTTTGGGAAGGATCGGAACCTCTTGTTAGCCATTTTGTGCTCCTCATCCCAAACTATAAGATTTTGGTGACATCGCGATCCAAAATTGGAAGATTTGGTGATGTAGATGAAATGCAACCCCTTGGTGAACCACATGCTGCAAATCTAATTCGCCATTCAGCATCCCTGCAGAATCAGAGCAACGCTGATATTCCTGATGATGTTATAAAAGAGGTGATTTCTATTCCAGTTATAATATTATAA 1056 0.4157 MAMIVDAALGHVVNELLTSVSKMKNKAVKFKPTLEKIEKTLESIGPLVNQIEELNKRLDRSPPEEIVRLINHMRSGKELVLKCSKVQWWNCCYKANYQEELQAFDEEINRFFQINMLLQVLAVIIKFHAEFRNADLRNERIELWGVCSPPKPPDFTVGFDVPLNKLKDKLLRYELSVSVLTVTGLPGSGKTTLAQKFCWDDQVKGKFKENIFFVTFTKTPQLNSIVWKLYEHTGQLLSPKIRTDEDAVTYLKHLLEQIGRKGCPILLVLDDVWEGSEPLVSHFVLLIPNYKILVTSRSKIGRFGDVDEMQPLGEPHAANLIRHSASLQNQSNADIPDDVIKEVISIPVIIL. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02459 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 343 IPR027417 -
Seca11g02459 351 PRINTS Disease resistance protein signature 259 273 - -
Seca11g02459 351 PRINTS Disease resistance protein signature 179 194 - -
Seca11g02459 351 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Seca11g02459 351 Pfam NB-ARC domain 163 299 IPR002182 GO:0043531
Seca11g02459 351 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 131 IPR008808 -
Seca11g02459 351 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 345 IPR039203 GO:0050832
Seca11g02459 351 Gene3D - 142 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02459 Seca-Chr11 39697785 39699695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02459 175 335 WRKY Transcription Factor Family AT5G45050 29.341 1.09e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02459 - - mtr:25502906 379.407