LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g02458	ATAGTGAGAAGCTGCAATGGTTCTCCCTTGGAACTGAGAGTGATTGGCAAATCATTAAGTGAGCAGAATCCGGCGGGTTGGCAAAACAGAGCGAGGGAATTGTCCAAGGGTCCTTCAAATTTTGAGTCTAGCAATGATGTACTTGCTCATCTCCAAAAAAGGTTAGATGTATTGGATTTGGATCCTAAGGTCATAGAGTGTTTTGGAGACCTAGGCTTATTTCCTGAAGACCAGAGGATCCCTGCTGCTGCCCTTGTTGATATGTGGTCAGAACTGCATAAAGAAAATGATGGCAGTGCGATAGAGAAAATTTGTGAACTGGTCAAGCTGAACATGGCTGATATTTTTGTGACAAGGAAAGTTGCAAGTGGCACAGTTGATGATTACTATGTCACGCAGCATGGTCTTCTTCGGGAGCTAGCAATCAGACACACTAGCCAGGATCCAGAGAACAAGAGGAATAGATTAATCATTGACTTAAGTGGAAATAATCTTCCAACATGGTGGACTACAAAGAATAAGTATCACATTGCAGCCCGCATATTATCCATATCAACTGATGAAGCGTTCACTTCAGAATGGTGCAACTTGCAGCCAACTGAAGTTGAGGCTCTTGTGTTGAACCTTCGAGAGAAGAAGTGCACACTACCAATGTTCATCAAGAAAATGAATAAACTAAAAGTTTTGATAATCACAAATTATGACCTCTATCCTGCAGACATAGAGAATTTCGAGCTTCTTGATCATCTATCTAATCTCAAACGAATCAGATTAGAGAACGTTTCAATTCCTCTGCTCAGCAAGACAGGGGTGCATTTGAAGAATCTGCTGAAGTGTTCTTTCTTTATGTGCAATGTGAATGAAGCATTTGAAAATTGCAATATCCAAGTTTCAGGTATGCTGCCAAACTTGGTGGAGATGAACTTTGACAATTGCAATATGGTGGAATTGCCAGTTTTGGTCTCTAATATTGTTTCCTTAAAGAGTCTGAACATTACAAACTGCCATAGGCTTTCTGCACTTCCTGAAGGAATTGGAAAGTTGGTCAATTTGGAATCACTGAGGCTTAGTTCCTGCAAGAGTTTACTGGAGTTGCCTCACTCAATTACAAGCCTTCTTAACCTAAAATTTCTCAACATCTCTGATTGCATTAGCCTTAATGATTTACCTATGAATATTGGCAAGTTAGGTAAATTAGAAAAGCTGAACGTCAGAGGTTGCTCGAGATTAAGCAAGTTGCCATTGCCATCCTCAATCTCAGACCTTAAGGGCTTAAGGGATGTGGTATGTGATGAAGAGATGGCTACGTTATGGGAACCTTTCAAAAGCGTCCTTCGTGATCTGAGGCTAGAGGTCGATTGCTCAAGCTGA	1371	0.4092	IVRSCNGSPLELRVIGKSLSEQNPAGWQNRARELSKGPSNFESSNDVLAHLQKRLDVLDLDPKVIECFGDLGLFPEDQRIPAAALVDMWSELHKENDGSAIEKICELVKLNMADIFVTRKVASGTVDDYYVTQHGLLRELAIRHTSQDPENKRNRLIIDLSGNNLPTWWTTKNKYHIAARILSISTDEAFTSEWCNLQPTEVEALVLNLREKKCTLPMFIKKMNKLKVLIITNYDLYPADIENFELLDHLSNLKRIRLENVSIPLLSKTGVHLKNLLKCSFFMCNVNEAFENCNIQVSGMLPNLVEMNFDNCNMVELPVLVSNIVSLKSLNITNCHRLSALPEGIGKLVNLESLRLSSCKSLLELPHSITSLLNLKFLNISDCISLNDLPMNIGKLGKLEKLNVRGCSRLSKLPLPSSISDLKGLRDVVCDEEMATLWEPFKSVLRDLRLEVDCSS.	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g02458	456	PANTHER	PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8	1	452	IPR039203	GO:0050832
	Seca11g02458	456	Gene3D	-	57	144	IPR036388	-
	Seca11g02458	456	Gene3D	-	1	56	IPR042197	-
	Seca11g02458	456	PRINTS	Disease resistance protein signature	346	362	-	-
	Seca11g02458	456	PRINTS	Disease resistance protein signature	5	19	-	-
	Seca11g02458	456	Gene3D	Ribonuclease Inhibitor	180	442	IPR032675	-
	Seca11g02458	456	SUPERFAMILY	L domain-like	135	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g02458	Seca-Chr11	39684099	39686199	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g02458	304	414	WRKY Transcription Factor Family	AT4G12020	33.929	8.11e-08	53.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g02458	-		-	gmx:100812310	602.823