Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02453 ATGGGAGAGATGACGCAACTTGTTGCCCTTCTAACACGATTTCAAGACACCTTGAGGAAGATCTCTCAAATGGTGGAAGCAGCTGGAAAAAGCAAAAGGACCAGGCTAATTCTAAGGTCAACACTCAAGGATTTGACTCCTCTTGTCCAACAGATCAAGAAATACAACGAACAGTTGGATGCACCCACAGAAGAAATAAAGACTCTCATCAAAGAAAAAGATGCAGGGGCAAAGGAAGAAGGGTTTGTGTGCAAATGCTCTTCCAAGAATCACTGGTTGGACTGGAACAAGTATTTCTCTTGGCTTTCTCAGTTCTGCATGGACAGTGTTTGGCATAATTCCTCTGCTGCTTCTGATGACAAGCAAGCTCTTACAGCAAAGGATGTTAGAGACACACTTAATGAGGTGAGAGAAATTCTTGAGCTTCTTAACAGAGAAAACTTTGAGCAGAAATTTATTGGAGCTGGAGCACCAATCATCAAACGCCCTTTTGGTGTTCCTGAAAACCCAGAATTCACTGTTGGGTTGGATTTACCTTTGAACAAGTTGAAGATGGAGCTTCTCAAGGATGGTATGTCCATCCTTGTGTTGACTGGCTTGGGAGGATCCGGAAAAACCACTTTGGCAACAAAGCTCTGCTGGGATGAAAAAGTCAAGGGTAAATTCATGGAAAATATTTTATTTGTCACCTTCTCACAAACGCCCAAGTTGAAGATTATTATAGAAAGACTACTTGAACACTTTGGATATCCAGTCTCTGAGTTTCAAAGCGACGACGATGCAGTGAAACGATTGGGACTTGTGTTGAGGAAAAATGAGGGAAGTCCAATGTTGCTGGTCCTGGATGATGTTTGGCCTGGCTCAGAAGATCTCATTGAGAAATTTAAATTCCAGATACCAGATTTTAAAATTTTAGTGACTTCAAGGGTTGCATTTCCTAGATTTGGCACAACATGCATCCTAAAACCTCTTGTTCATGAAGATGCAATAACCCTTTTCCGCCATTATGCACTCTTGGAAAAAAGCACTTCAAATGTTCCTGAGGAAGATCTTGTCCAAAAGGTGCTTGTTCTTACTTCCTCACATAGAACTCCTTTGATTGTGAGAAATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTACATCACTCAGTTGTAGGCCTTATGGGTTGTGGCAAAAGTTAGCGAAGGAACTGTCACAAGGTCATTCTATACTTGATTCTAATACTGAATTACTTACTCACCTTCAAAAGCTCTTTGATGTTTTAGAAGATAATAATTCTGTCATCAAGGAGTGCTTCATGGACCTAGCGTTATTCCCCGAAGACCAAAGAATTCCTGCTACCGTTCTCATTGATATGTGGGCAGAGTTATATGGACTAGATGATCACGGCATGGATGCAATGTCCATCATCAACAAATTAGACTCCATGAATCTGGCAAATGTCTTAATAGCAAGGAAAAATGCAAGTGACACAGACAATTACTACTACGATAACCACTTCGTTGTCCTTCATGATCTTCTAAGAGAGCTTGGGATTTATCAAAGCATTCAGGGGCCAATGGAAAAGAGAAAGAGACTAATTATTGACATAAATGAAAATAAATGTGAATGGTGGCTTGGGGAGAAGCAGCAAGGCATGATGGTTCGCATGTTGTCAAAATTTCTTAGATGGGGTGTCAAACAGAGTCCCCAACAGGTCTCTGTCCGCACATTGTCTATATCAACTGATGAAACTTGCGCTTCATATTGGTCTCACATGCAACCAACTCAAGCTGAGTTGTTGATTTTAAATCTTCGAACAAAGAAATACTCTTTTCCAGAGTTCATGGAGAAACTGAGCAAACTAAAAGTTCTGATTGTTACAAATTACGGTTTTCATCCTTCTGAACTAAACAATACCAAGCTACTTTGCTCTTTATCCAGCCTGAAAAGAATAAGACTAGAGAGGATTTCTGTTCCTTCATTTGACACGTTGAATAATCTTAAGAAACTATCCCTCTACATGTGTAATACGAGTCATGCTTTCCGAAACGGTATGATCCTAAGTTCTAATGCATTTCCAAATCTAGAAGATTTGAACATTGACTATTGCAAGGATTTGGTGGAATTGCCTTCTGGGGTCTGTGATATCACCCCACTAAAGAAGCTCAGTATTACTAATTGCCACAAGCTCTCTGTGTTGCCCCAACAAATTGGAAAGTTGGAGAATTTGGAACTATTAAGGCTGAATTCCTGTACTGATTTGGAAGGAATGCCAGATTCTATTGGAAGGCTTTCAAATCTGAGACTTCTTGACATCTCAAACTGCATAAGCCTTCCAAATTTACCGGAGGGAATTGGCAATCTGTGTAATCTAAGAAATCTCTACATGACAAGTTGTGCAATGTGTGAATTGCCATTCTCAGTGGTTAATCTCAAGAATTTAAAGGTGACATGCGATGAAGAGACGGCTGCTTCATGGGAAGCTTTCAAACCTATGATTTCCAATTTAGAGATAGAGGTTCCTCAAGTTGATGTTAACTTAAACTGGCTTCACTCGATTCGCTCCTAA 2559 0.4017 MGEMTQLVALLTRFQDTLRKISQMVEAAGKSKRTRLILRSTLKDLTPLVQQIKKYNEQLDAPTEEIKTLIKEKDAGAKEEGFVCKCSSKNHWLDWNKYFSWLSQFCMDSVWHNSSAASDDKQALTAKDVRDTLNEVREILELLNRENFEQKFIGAGAPIIKRPFGVPENPEFTVGLDLPLNKLKMELLKDGMSILVLTGLGGSGKTTLATKLCWDEKVKGKFMENILFVTFSQTPKLKIIIERLLEHFGYPVSEFQSDDDAVKRLGLVLRKNEGSPMLLVLDDVWPGSEDLIEKFKFQIPDFKILVTSRVAFPRFGTTCILKPLVHEDAITLFRHYALLEKSTSNVPEEDLVQKVLVLTSSHRTPLIVRNCKGLPLAIKVIGTSLSCRPYGLWQKLAKELSQGHSILDSNTELLTHLQKLFDVLEDNNSVIKECFMDLALFPEDQRIPATVLIDMWAELYGLDDHGMDAMSIINKLDSMNLANVLIARKNASDTDNYYYDNHFVVLHDLLRELGIYQSIQGPMEKRKRLIIDINENKCEWWLGEKQQGMMVRMLSKFLRWGVKQSPQQVSVRTLSISTDETCASYWSHMQPTQAELLILNLRTKKYSFPEFMEKLSKLKVLIVTNYGFHPSELNNTKLLCSLSSLKRIRLERISVPSFDTLNNLKKLSLYMCNTSHAFRNGMILSSNAFPNLEDLNIDYCKDLVELPSGVCDITPLKKLSITNCHKLSVLPQQIGKLENLELLRLNSCTDLEGMPDSIGRLSNLRLLDISNCISLPNLPEGIGNLCNLRNLYMTSCAMCELPFSVVNLKNLKVTCDEETAASWEAFKPMISNLEIEVPQVDVNLNWLHSIRS. 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02453 852 Gene3D - 324 420 IPR042197 -
Seca11g02453 852 PRINTS Disease resistance protein signature 371 385 - -
Seca11g02453 852 PRINTS Disease resistance protein signature 194 209 - -
Seca11g02453 852 PRINTS Disease resistance protein signature 271 285 - -
Seca11g02453 852 PRINTS Disease resistance protein signature 759 775 - -
Seca11g02453 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 438 IPR027417 -
Seca11g02453 852 Coils Coil 126 146 - -
Seca11g02453 852 Gene3D - 421 514 IPR036388 -
Seca11g02453 852 SUPERFAMILY RNI-like 605 812 - -
Seca11g02453 852 Gene3D - 160 312 IPR027417 -
Seca11g02453 852 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 847 IPR039203 GO:0050832
Seca11g02453 852 Gene3D Ribonuclease Inhibitor 562 825 IPR032675 -
Seca11g02453 852 Pfam NB-ARC domain 180 403 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02453 Seca-Chr11 39300224 39305135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02453 641 811 WRKY Transcription Factor Family AT4G12020 28.718 6.04e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02453 - - gmx:112997603 1100.5