Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02442 ATGGAACTGAGCTTGGATTTGAGTTTAGCCTTTGTCCCCAGAACCATTTCAGAGCTTCTTGGGGACGTTTCTCAGAACAAAGATGTGTCTCAGAAAATGACCATGCTTGAGGACTTTGTCAAAAGGTTGGAAGATGAGATGAGAAAGATCGAGGCTTTCAAACGTGAGCTTCCTCTTTGCATGATCCTTGTAAACGATGCTTTAACTAGATTGAAAGAGGAAATAGATCAGTGTACTAGAATGCAAGATGGACCTGTGCTTGAAGAATTGAAGCCACTGTTGAAAACCAATTCTGAAGGAATTAGGTCTTTGACTATGGGGAATGAAACCAGTGACAAGAAGAACTGGATGAGCTCTGCTCAGCTATGGAGTGCTCAAACCGAATTGAGGAATAGAGAGGATGATCGGTCTGTGCCCCACAACCCAATTAAACCATTGAACGAGACCAACAAGAATGGAGGAGCATTTGTGGCATTCAATGGGAAGTCGTGTGTTTCAAAGACAGTGATAAGGGATGACAAGGAGGTTTCACAGGTTCCTAGTATTGGTTTGATGACTCCAGATTTTGAACTGAGTCATAGAAATTCCAGAAGCACAGTTGAGATTAAGGGTCAACCACAACCGCGGCAGAATCCGAGGAAACAAAGGAGATGTTGGTCACCCGAGCTTCATCGGCGATTTGTTGATGCTCTTCAACGATTAGGAGGACCACAAGTGGCCACACCAAAGCAGATTAGAGAACTGATGCAGGTGGGGGACTTGACAAATGATGAAGTGAAAAGCCATTTGCAAGTGAGTGTTTAA 804 0.4378 MELSLDLSLAFVPRTISELLGDVSQNKDVSQKMTMLEDFVKRLEDEMRKIEAFKRELPLCMILVNDALTRLKEEIDQCTRMQDGPVLEELKPLLKTNSEGIRSLTMGNETSDKKNWMSSAQLWSAQTELRNREDDRSVPHNPIKPLNETNKNGGAFVAFNGKSCVSKTVIRDDKEVSQVPSIGLMTPDFELSHRNSRSTVEIKGQPQPRQNPRKQRRCWSPELHRRFVDALQRLGGPQVATPKQIRELMQVGDLTNDEVKSHLQVSV. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02442 267 MobiDBLite consensus disorder prediction 196 216 - -
Seca11g02442 267 SUPERFAMILY Homeodomain-like 212 264 IPR009057 -
Seca11g02442 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 267 IPR017930 -
Seca11g02442 267 MobiDBLite consensus disorder prediction 198 214 - -
Seca11g02442 267 Coils Coil 26 56 - -
Seca11g02442 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 264 IPR044787 GO:0003700|GO:0006355
Seca11g02442 267 MobiDBLite consensus disorder prediction 129 149 - -
Seca11g02442 267 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 265 IPR006447 GO:0003677
Seca11g02442 267 Gene3D - 213 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02442 Seca-Chr11 38776105 38778524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02442 1 267 G2-like Transcription Factor Family AT4G37180 40.569 4.05e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca11g02442 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02442 - - lang:109332341 303.908