Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02402 ATGGCTGCTATCTTGCTCAGGCTTCAGTTTCATGACTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAGTGGTCCACAATCAGAGAAACTAGCATTTGCACATCAATGGGTTAGGGGGTTTGGAGTGATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTTCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGCCATAGTCATGGTCTTAACTCTTAACTTACTTGATTAG 258 0.4496 MAAILLRLQFHDCFVEGCDGSILIDSGPQSEKLAFAHQWVRGFGVIERAKAQLEASFPGVVSCADIVALAARDAIVMVLTLNLLD. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02402 85 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Seca11g02402 85 PRINTS Haem peroxidase superfamily signature 61 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 Gene3D - 1 78 - -
Seca11g02402 85 SUPERFAMILY Heme-dependent peroxidases 1 77 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 PANTHER PEROXIDASE 25-RELATED 2 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 PRINTS Plant peroxidase signature 60 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 PRINTS Plant peroxidase signature 41 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 Pfam Peroxidase 1 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g02402 85 ProSiteProfiles Plant heme peroxidase family profile. 1 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02402 Seca-Chr11 37792608 37792967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02402 1 75 Peroxidase AT4G25980 72.000 1.29e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02402 K00430 - gmx:547549 128.257