Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02390 ATGGGAGCAGCTGCAAGGGATAACGGCGGAGGGAAAGCCGTGAGCCACTGCTCACGGTGGTGGGTGGCGCAGCTTAGGTTCCTTTTCAGCTTCCGTTTTCAGAATGGGAAGCCATGGATGACTCAGCTTGCTGCTGTTGCTTGTCTCTCCCTTGCTGCCAAAGTGGAGGAGACTCAAGTTCCCCTTTTACTAGACCTTCAAAGAAGATATGATTCCCGCACACATTCTAGATTTATGAGTTATCTACCTTTTGTGTTGGCAACTGCTACAATGATGCATGTTGTCAATAGCGTGGAGCCTCATCTAGGAGTCGAATACCAAAGCCAGCTACTTGGTATTCTTGGAATCAACAAGGACAAGGTGGATGAATGTTGCAAGGTTATGTTGGAAGTGTGGTCAGGGTATGAGCAGGGGAAGCAATGCATCAAACGCAAGTTTGGGTCCATTCCTGGTAGCCCAAATGGCGTAATGGATGTGTCTTTTAGCTGTGATAGCTCCAATGACTCTTGGGCTGTAGCTTCTGCTTCTGTGTCATCCTCACCAGAGCCTTTGTCCAAGAAAACTAGGAGCTTCAACTAA 579 0.4801 MGAAARDNGGGKAVSHCSRWWVAQLRFLFSFRFQNGKPWMTQLAAVACLSLAAKVEETQVPLLLDLQRRYDSRTHSRFMSYLPFVLATATMMHVVNSVEPHLGVEYQSQLLGILGINKDKVDECCKVMLEVWSGYEQGKQCIKRKFGSIPGSPNGVMDVSFSCDSSNDSWAVASASVSSSPEPLSKKTRSFN. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02390 192 Gene3D - 21 97 - -
Seca11g02390 192 CDD CYCLIN_AtCycD-like_rpt2 77 128 - -
Seca11g02390 192 Pfam Cyclin, C-terminal domain 74 163 IPR004367 -
Seca11g02390 192 Pfam Cyclin, N-terminal domain 40 72 IPR006671 -
Seca11g02390 192 SUPERFAMILY Cyclin-like 27 72 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02390 Seca-Chr11 37430922 37432456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02390 26 189 Core Cell Cycle Gene Families AT5G67260 36.404 5.93e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02390 K14505 - gmx:100795892 205.682