Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02389 ATGGCGGGAAACCATTTTCCTGTGGGTATGCATGTTCTTGCTGTTGACGAAGACCAAACTGGTCTAAAAGTGTTGGAGAACTTGCTTCGCAATGCTAGTATCATGGTTACTACAACTTGTCAAACAATTAAGGCACTAGAAATATTGAGGAAAAACAAAAATGAGTTTGAGCCGGTTATTAGTTTTATAAACATGGAAGATATGGATTGTTTCAAAATTCTTGAACAAGTGATACTTGAAATGGACTTACCAATGATTAGTAAGTTCAAACTCATTTGTCTTAATATGTATTTAACTTGA 300 0.3433 MAGNHFPVGMHVLAVDEDQTGLKVLENLLRNASIMVTTTCQTIKALEILRKNKNEFEPVISFINMEDMDCFKILEQVILEMDLPMISKFKLICLNMYLT. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02389 99 Gene3D - 6 94 - -
Seca11g02389 99 SUPERFAMILY CheY-like 9 86 IPR011006 -
Seca11g02389 99 ProSiteProfiles Response regulatory domain profile. 11 99 IPR001789 GO:0000160
Seca11g02389 99 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 86 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02389 Seca-Chr11 37425124 37425809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02389 2 86 Response Regulator Gene Family AT2G25180 64.706 8.29e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca11g02389 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02389 - K14491 ccaj:109794416 113.62