Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02384 ATGAGATGCAGGTATCTGAAAGCAGTGCTAAGACAAGAAGTTGCTTACTTTGATTTGCATGTCACAAGTACGTCAGAGATCATCACTAGTGTCTCCAATGATAGTCTCGTAATTCAAGATGTTCTTAGTGAGAAGGTTCCAAATTTCTTGATGAACTTGTCTTTGTTCATTGGGAGCTACTTAGCAGCTTTTGCATTCTTGTGGAGATTGGCCATTGTGGGGTTTCTATTTTTGGTTCTTCTGGTGATCCCTGGTTTTATTTATGGCAAGATTTTGATGGGATTGGCTAGCAAGATCAGAGAAGAGTATAATCAAGCTGATACAATAGCAGAACAAACAATATCTTCCATCAGAACCGTCTACTCATTTGTTGGGGAAAGCAAGTCCATGATTGCTTTCTATGATGCTCTACAAGGAACAGTTAAGTTGGGGCTAAAACAAGGCTTAGCTAAAGGCCTAGCCATTGGAAGCAACGGTCTTGTATACTGTGTTCCCAAATATTTTTGCAATTTTAAGTTTATTTGTGTTATTGCTATTTTATTCATACAGGGAGGTTTGAGTTAG 564 0.3848 MRCRYLKAVLRQEVAYFDLHVTSTSEIITSVSNDSLVIQDVLSEKVPNFLMNLSLFIGSYLAAFAFLWRLAIVGFLFLVLLVIPGFIYGKILMGLASKIREEYNQADTIAEQTISSIRTVYSFVGESKSMIAFYDALQGTVKLGLKQGLAKGLAIGSNGLVYCVPKYFCNFKFICVIAILFIQGGLS. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02384 187 PANTHER ABC TRANSPORTER B FAMILY 1 167 IPR039421 -
Seca11g02384 187 Pfam ABC transporter transmembrane region 1 161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca11g02384 187 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca11g02384 187 Gene3D ABC transporter type 1, transmembrane domain 1 187 IPR036640 GO:0005524|GO:0016020
Seca11g02384 187 SUPERFAMILY ABC transporter transmembrane region 1 162 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02384 Seca-Chr11 37377428 37378150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02384 1 185 Calmodulin-binding Proteins AT2G36910 36.757 1.18e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02384 K05658 - gmx:100809399 250.366