Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02368 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTTTTCATATTTTAAGAATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGGTAAGTTTTATTTACACTATGTTTAA 450 0.3667 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRFSYFKNNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVGKFYLHYV. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02368 149 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Seca11g02368 149 SUPERFAMILY Nucleic acid-binding proteins 15 115 IPR012340 -
Seca11g02368 149 Gene3D - 8 115 IPR012340 -
Seca11g02368 149 CDD RPA1_DBD_A_like 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02368 Seca-Chr11 36999642 37000178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02368 20 130 Core DNA Replication Machinery Family AT5G08020 27.193 3.64e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02368 - - adu:110274503 172.94