Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02366 ATGAGTCTATCGAGCGAGCTTGGAACAAATCCCAAAGAGGTGGAGAAGAAGAAGCCAACAACACAAACCACCCAACCTCACTGCATTCTTTCAACGCCTCAGAAGATGCCAACTGAGTCTGAGCTCGAAGAATTCTTCGCTGCCGCTGAGAAAGACATTCAGAAACAGTTTTTAAATAAGTATAATTATGATATTGTGAAGGACGTGCCATTGGAAGGGCGTTACGAGTGGGTTCAATTGAAGCCGTAA 249 0.4418 MSLSSELGTNPKEVEKKKPTTQTTQPHCILSTPQKMPTESELEEFFAAAEKDIQKQFLNKYNYDIVKDVPLEGRYEWVQLKP. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02366 82 Pfam Cyclin-dependent kinase inhibitor 36 80 IPR003175 GO:0004861|GO:0005634|GO:0051726
Seca11g02366 82 MobiDBLite consensus disorder prediction 21 35 - -
Seca11g02366 82 PIRSF CKI_KRP_plant 2 82 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca11g02366 82 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 4 81 IPR044275 GO:0004861|GO:0045736|GO:0051726
Seca11g02366 82 MobiDBLite consensus disorder prediction 1 35 - -
Seca11g02366 82 Gene3D p27 30 82 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02366 Seca-Chr11 36976413 36977190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02366 36 82 Core Cell Cycle Gene Families AT5G48820 65.957 5.99e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02366 - - ccaj:109818608 103.99