Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02336 ATGGAGGTTTGCAGGGGATCCATCATTCAGTTGCTGAATTTCGCTGATGCCGTTGCGATCGGGAGTCGTTCGCCTGAGCGGTTGTTTGGAATCCTCGACCTGTTTGAGACATTGCGTGGCCTAATTCCCGAGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGCTCATGAATAAAGCAATCACGATTTCGAAGAGATTGGGAGAAGCAATTAGGGGTATTTTCATGGAGTTGGAGAATCTGATTCGCCGCGATCCGGTGAAGGCGGCGGTTCCCGGTGGCGGGGTTCACCCCATTACCCGTTACGTGATGAACTACCTCTGTGCCGCTTGTCGTTCACGACAGACTCTAGAGCAAGTGTTTGAAGACTATGGACATCCCTTGAAGGAATACCCCAAGCTTGAGGATAGAATAGCACACTCTTCCTCTCTCTCAATGCAGATGGATTGGATTATGGAGCTATTGGAGAGCAATTTGGAAGGAAGGTCCAAAATCTACAAGGAACCTGCTTTGTGCTATGTTTTCTACTTTTCTTGA 540 0.4796 MEVCRGSIIQLLNFADAVAIGSRSPERLFGILDLFETLRGLIPEFESLFCDQYSVSLMNKAITISKRLGEAIRGIFMELENLIRRDPVKAAVPGGGVHPITRYVMNYLCAACRSRQTLEQVFEDYGHPLKEYPKLEDRIAHSSSLSMQMDWIMELLESNLEGRSKIYKEPALCYVFYFS. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02336 179 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 176 IPR004140 GO:0000145|GO:0006887
Seca11g02336 179 SUPERFAMILY Cullin repeat-like 1 177 IPR016159 -
Seca11g02336 179 Gene3D Exocyst complex component Exo70 1 178 - -
Seca11g02336 179 Pfam Exo70 exocyst complex subunit 2 176 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02336 Seca-Chr11 36075271 36075810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02336 1 176 EXO70 exocyst subunit family AT5G58430 74.011 7.89e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02336 K07195 - gmx:100803694 295.434