Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02332 ATGGATCACCGTCTTCCTCCTCTTCCACATCTCCCTTCGTTTCCCCTCCCTCTCTATCCGCCTCTGGGACTCCGACGGCGAGTTCCTCCTCATCGAAGCCGCCTTCCACCTCCCTCGCTAGCTCAACCCCGACACCTCCCTCCACCGCGTCTTCATCCGCTCCGGGCTAGGGTTAGGGTTCCGGCGTCAGTGGCGCAGGTTCTGAAGCACGAGCCCTGCTTGATTTCGCTGGCAGTGGAAGGGTTTTATGACACGGACGTGGATTCCATGAAGTTCGCAACGAAGATGGAGAGGGGAAGGAAGTGTGGTGCTATAGAGAAAGTTGTTGAGAGGAGACAAAGACGAATGATAAAAAATAGAGAATCAGCAGCAAGGTCTCGGGCTTGCAAGCAGGCCTACACTTTCGAACTAGAGGCTGAAGTTGAAAAACTTAAGGAAGTAAACAGGGAATTACAAAGAAAACAGACAGAAATTATGGAAATGCAGAAAAATAAGGTGAGTTCAAGCAATTCCCAGGGAGGTTTCAAATTTCTTGAAAATGCTAAGGATTTTCCAACCATTAGTAAGTCCAGAAACCAAACCCAAATTTGTTGGTTTAACTTCTTTTAG 609 0.4844 MDHRLPPLPHLPSFPLPLYPPLGLRRRVPPHRSRLPPPSLAQPRHLPPPRLHPLRARVRVPASVAQVLKHEPCLISLAVEGFYDTDVDSMKFATKMERGRKCGAIEKVVERRQRRMIKNRESAARSRACKQAYTFELEAEVEKLKEVNRELQRKQTEIMEMQKNKVSSSNSQGGFKFLENAKDFPTISKSRNQTQICWFNFF. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02332 202 Coils Coil 130 164 - -
Seca11g02332 202 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 88 160 IPR043452 GO:0003700|GO:0045893
Seca11g02332 202 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Seca11g02332 202 MobiDBLite consensus disorder prediction 33 49 - -
Seca11g02332 202 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 160 IPR004827 GO:0003700|GO:0006355
Seca11g02332 202 SUPERFAMILY Leucine zipper domain 111 159 IPR046347 GO:0003700|GO:0006355
Seca11g02332 202 MobiDBLite consensus disorder prediction 27 51 - -
Seca11g02332 202 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 109 166 - -
Seca11g02332 202 Pfam bZIP transcription factor 111 164 IPR004827 GO:0003700|GO:0006355
Seca11g02332 202 CDD bZIP_plant_BZIP46 111 165 - -
Seca11g02332 202 Pfam SGT1 protein 55 98 IPR010770 -
Seca11g02332 202 Gene3D - 109 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02332 Seca-Chr11 35947843 35949356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02332 96 166 bZIP Transcription Factor Family AT3G19290 70.833 9.21e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g02332 bZIP_1 2.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02332 K14432 - mof:131156537 114.005