Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02309 ATGAATAAGGAACTTTCCAAATTGATGATTCAATTGGAATTAGATGCAGACAGAGGATTTAAAGGGAACGGGAGAGGAGGTGAAGTGAATCAACCCAAGCTATATAGAGGGCCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGTTTGGTTCCTGGGGGCATTAATTCTAATGGTAAGGCTTTCATTCTTAATACAGGAAGTGGTGATGGGTTTATTGTGGCCATTTGTTTGCAACCTTCACATGTTGATGCTTTGAAGAAGTTGTTTTATGAGGATATGGAGACTACTACTTCCTAG 369 0.4065 MNKELSKLMIQLELDADRGFKGNGRGGEVNQPKLYRGPGKEGKFRGDPNLYVVGWANFAFYATDFGWGKPVCLVPGGINSNGKAFILNTGSGDGFIVAICLQPSHVDALKKLFYEDMETTTS. 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02309 122 Pfam Transferase family 40 114 - -
Seca11g02309 122 Gene3D - 27 116 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02309 Seca-Chr11 34774431 34775537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02309 48 115 Monolignol Biosynthesis Gene Families AT5G48930 40.580 3.34e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02309 K13065 - gmx:100819383 139.813