Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02297 ATGACAGAAAAACATCCCCGGAGCCTCATTGCTACACCACCTGACGAAGGACAACTTATAAGCATGCTGCTTAAGCTCATCAATGCAAAGAAAACCATGGAAATTGGTGTCTTCACTGGTTACTCTCTGCTTTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGATATTGGCTATGGACGTGAACCGCGAATACTATGAGTTGGGATTGCCCATAATTGAAAAAGCTGGTGTGGCTCACAAAATTGACTTCAGAGAAGGACCTGCTCTGCCTCTTCTTGACGAATTGCTTAAAGATGAAAGTAAGAAGGGAGCATTCGATTTTATTTTTGTGGACGCTGATAAGAATAACTACTTAAATTATCATAAGAGAGTGATTGATCTTGTGAAGGTTGGGGGGCTAATCGGCTACGATAACACCCTATGGAATGGATCTGTAGCGGAGCCACCTGATGCTCCTATGTTGGATTACATTAAGCATTGTCGCGGTCATGTGATGGAGTTCAACGAGTATCTGGCTGCTGATTCTAGGATCGAGATTTGCCAGCTACCCGTTGCTGATGGTATTACCCTTTGCCGACGCATCGTCTGA 591 0.4501 MTEKHPRSLIATPPDEGQLISMLLKLINAKKTMEIGVFTGYSLLSTALALPPDGKILAMDVNREYYELGLPIIEKAGVAHKIDFREGPALPLLDELLKDESKKGAFDFIFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWNGSVAEPPDAPMLDYIKHCRGHVMEFNEYLAADSRIEICQLPVADGITLCRRIV. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02297 196 Pfam O-methyltransferase 2 195 IPR002935 GO:0008171
Seca11g02297 196 PANTHER O-METHYLTRANSFERASE-RELATED 2 195 - -
Seca11g02297 196 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 195 IPR002935 GO:0008171
Seca11g02297 196 Gene3D Vaccinia Virus protein VP39 1 196 IPR029063 -
Seca11g02297 196 CDD AdoMet_MTases 37 135 - -
Seca11g02297 196 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 194 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02297 Seca-Chr11 34454403 34456304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02297 1 195 Monolignol Biosynthesis Gene Families AT4G34050 73.846 7.57e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02297 K00588 - gmx:100795858 327.791