Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02293 ATGGCAGGCATCCGAAAAATCGCAACTAGCATAATTCGAGCAACAAATCAGGGTGACTTAACTCAGAGAATCAATCTAACCCCATGGGATCTCCAATTACTCAAAATTGAAGCAATTCAACAAGGGCTTCTTTTCCATAAACCCGAAACAAAAGACACAACAAACGGCATCCTGCAGCACCTGAAGCACTCACTTTCCTCAACCCTTTCCTTCTTCCCACCCCTCGCAGGCCGTCTCGTCATTACCAAACACAAAGATAACACTGCCTTCTCTTTCATCGCTTGCAACAACGTAGGTGCACTCTTTGTCCATGCCACAGCAGAGAAAACCAGAGTTGCTGATATCCTTCAACCAAACTACGTCCCTCCCATTGTCCACTCTTTCTTTCCACATAACGGAGTTAGAAACTACGAAGGAACATCACAGCCATTGCTAGCAGTGCAAGTGACGGAGCTACTTGACGACATCTTCATTGGCTGTGCAATTAACCATGTGGTTGCTGACGGCAAGTCGTTTTGGCATTTCATCAATTCATGGGCTGAAATCTCACGGGGTTTGGATAAAGTAACCAAACTCCCCGCACTTGATCGTTGGTTTCCAGATGGAATTATCGATCCCATACGCTTTCCTTTCAGAACGGAAGAGAAGAGGAAACTGTGTGAACTTCCACCTCTTCGGATCTTTCATTTCACAAAAGAGAAAATTGCGCAACTCAAATCAAAAGCAAATGCAGAGGTTGGGATGGAAAGAATCAGAATATCTTCCTTGCAAGCACTTTTAACTCACTTTTGGCGTTTTGTGATAGTTAGCCAACAAATTCACCGACATGAAGAGACCCGTTATATGGTAATCATGGACGTTAGGCATAGGATGTGCCCACCATTGCCAGAGAATTATTTTGGAAACGCAGGAATGGTTGGGCTTGTCATCATGAAAGCATGGGAATTGTTGGACGGTGGGCTGGGGAAGGGTGCTCAGGGAATGAACAAGATGATTTCTTTGCACTCTGGTGAGAAGGTAAGGAATCACTATGAGTCTTGGTTGAAAACCCCATCTGTGATAACACCGGGTATGGCGTCGAGAAGTATTGCGTTGCTCACCAACAGTTCGCCAAGCTTCAACTTTTATGGTAATGATTTTGTTGGGTAA 1149 0.4465 MAGIRKIATSIIRATNQGDLTQRINLTPWDLQLLKIEAIQQGLLFHKPETKDTTNGILQHLKHSLSSTLSFFPPLAGRLVITKHKDNTAFSFIACNNVGALFVHATAEKTRVADILQPNYVPPIVHSFFPHNGVRNYEGTSQPLLAVQVTELLDDIFIGCAINHVVADGKSFWHFINSWAEISRGLDKVTKLPALDRWFPDGIIDPIRFPFRTEEKRKLCELPPLRIFHFTKEKIAQLKSKANAEVGMERIRISSLQALLTHFWRFVIVSQQIHRHEETRYMVIMDVRHRMCPPLPENYFGNAGMVGLVIMKAWELLDGGLGKGAQGMNKMISLHSGEKVRNHYESWLKTPSVITPGMASRSIALLTNSSPSFNFYGNDFVG. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02293 382 Gene3D - 3 204 IPR023213 -
Seca11g02293 382 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 380 - -
Seca11g02293 382 Gene3D - 223 382 IPR023213 -
Seca11g02293 382 Pfam Transferase family 7 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02293 Seca-Chr11 34111723 34112871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02293 59 317 Monolignol Biosynthesis Gene Families AT5G48930 31.273 7.53e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02293 - - gmx:100797643 440.269