Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02292 ATGGCTGCTGTTCTTCGAGTCATCTCCACCACTACAATCCAAGCACCGAGTCACAATAATGGTGACTCAAGTCGGAAAATCGATTTAACCCCGTGGGATCTCCAATTCCTCCCACTTGATCCCGTCCAAAAAGGCCTTCTTTTTCACCTTCCTCTAGACACATCGAAGCATATTATCCATCACTTGAAGCATTCCCTTTCCTCCACTCTTTCCTTCTTCCCACCTCTCACAGGTCGTCTCATTATCATTGAACACGAAGATAACACTGCCTCCTCTTTCATCGCTTGCAACAATAAAGGTGCACTGTTTGTCCATGCAACAACAGAGAACACCACTGTTGCGGACATCCTTCGACCTAACTATGTCCCTCCTATTGTCCACTCCTTCTTTCCACTTAACGGAGTTAGAAACTTCGAAGGCACATCACAACCATTGCTTGCAGTGCAGGTGACGGAGTTAGTTGATGGTATTTTCATTGGCTGCACAATGAACCACGTGGTTGTTGACGGCAAGTCGTTTTGGCTTTTCTTCAATTCTTGGGCTGAAATCTCACGGGGCTGCCTTAAAGTATCCAAAATCCCTGCATTTGAACGCTGGTTTCTGGATGACATTGACTGTCCGATACGATTTCCTTTCACAATGGAAGCACAAAAGCAACACTTTGAAAGCCTCAATCCACCACCTGAGAGGATCTTCCATTTCACAAAGGGGAAAATTGCGCAACTCAAATCGAAAGCAAACGCAGAAGCCAACACTGACAAAATATCTTCTCTGCAAGCACTTCTAACTCACCTTTGGCGCTCTGTGATCCGTTGCAAACGACTTGACCCACAAGAAGAGGTTCATTATATGTTGGTGATTGGTGTTAGACCCAGGATGGTTCCTCCATTACCAGAGGATTACTTTGGAAATGCGGCACTGGTTGGTGGTGTCACCGTGAAAGCAGGGGAGCTACTAGAGGGTAGGCTTGGGAAGGGTGCTTGGGAGATGAACAAGATGATTGCTTTGTATTCTGATGAGAAGGTAAAGAAACACTATGAGTCTTGGGTGAGAAATCCAAGGCTGCTTATGTTGGGAAACCTGACCGGTGGTAATTCCTTGGCCACCAGTAGTTCCCCAAGGTTTAATGTTTATGGTAATGATTTTGGTTGGGGAAAGCCTGTGGCTGTTCGAAGTGGCGGAGCAAGTAAAAGAAATGGAAAGATTACTGTATTTGCTGGAGCTGAGGAAGGTAGTATTGACATTGAAGTGTGCCTTCCTTATGAGATTTTGGAGGCATTGGGAAATGACTCTGAGTTCATGGATGCCATTTCCAACTAA 1320 0.4545 MAAVLRVISTTTIQAPSHNNGDSSRKIDLTPWDLQFLPLDPVQKGLLFHLPLDTSKHIIHHLKHSLSSTLSFFPPLTGRLIIIEHEDNTASSFIACNNKGALFVHATTENTTVADILRPNYVPPIVHSFFPLNGVRNFEGTSQPLLAVQVTELVDGIFIGCTMNHVVVDGKSFWLFFNSWAEISRGCLKVSKIPAFERWFLDDIDCPIRFPFTMEAQKQHFESLNPPPERIFHFTKGKIAQLKSKANAEANTDKISSLQALLTHLWRSVIRCKRLDPQEEVHYMLVIGVRPRMVPPLPEDYFGNAALVGGVTVKAGELLEGRLGKGAWEMNKMIALYSDEKVKKHYESWVRNPRLLMLGNLTGGNSLATSSSPRFNVYGNDFGWGKPVAVRSGGASKRNGKITVFAGAEEGSIDIEVCLPYEILEALGNDSEFMDAISN. 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02292 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 434 - -
Seca11g02292 439 Gene3D - 5 209 IPR023213 -
Seca11g02292 439 Gene3D - 213 429 IPR023213 -
Seca11g02292 439 Pfam Transferase family 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02292 Seca-Chr11 34009014 34010333 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02292 62 422 Monolignol Biosynthesis Gene Families AT5G48930 28.385 7.86e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02292 - - gmx:100500257 598.201