Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02280 ATGTGGGATCTCAATGACTCACCCGATCAGAGAAAGGATGAGGAATCTGAAGGGTGTTCTTCCCTCAAGACTTCCATAGATGGGGATGATGATAAAGGCAAAAGGGTTGGATCTGTTTCCAATTCAAGTTCTTCAGCAGTGGTCATAGAGGACGGATCAGAACCAGAAGAAGAAGAGGAAGAAGGTGAGAGGGAAGGTAACAGAACGATGAAGAAAAGAAGCAGCAAGATATTTGGGTTCTCTGTAACAACCCAAAATGAAGATAGTGACCACCCACCTGTGACAAGGCAATTTTTCCCTGTGGAAGAGCCTGATATGGCAGTTGCATCCAGTGGTGGAGGAACCTCTGCCTTCCCTCGTGCTCACTGGGTAGGTGTGAAATTTTGTCAATCAGAAGCACTTGGAACTGGAAAATCAGTGGAAGTTTCACAACCCATGAAGAAGAGTAGAAGAGGACCAAGGTCAAGAAGCTCACAATATAGGGGAGTCACCTTTTACAGAAGAACAGGTCGATGGGAGTCTCATATATGGGATTGCGGAAAACAGGTGTATCTGGGTAAGTATAATGATAAGAATGATTGTGTGGATTTGACACAGCACATGCAGCTGCTCGGTGAGCACTTGCCTCTCTCCCTCCTCTAG 642 0.4579 MWDLNDSPDQRKDEESEGCSSLKTSIDGDDDKGKRVGSVSNSSSSAVVIEDGSEPEEEEEEGEREGNRTMKKRSSKIFGFSVTTQNEDSDHPPVTRQFFPVEEPDMAVASSGGGTSAFPRAHWVGVKFCQSEALGTGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGKYNDKNDCVDLTQHMQLLGEHLPLSLL. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02280 213 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 86 191 - -
Seca11g02280 213 Gene3D AP2/ERF domain 158 195 IPR036955 GO:0003700|GO:0006355
Seca11g02280 213 MobiDBLite consensus disorder prediction 1 36 - -
Seca11g02280 213 MobiDBLite consensus disorder prediction 1 76 - -
Seca11g02280 213 SUPERFAMILY DNA-binding domain 158 193 IPR016177 GO:0003677
Seca11g02280 213 MobiDBLite consensus disorder prediction 139 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02280 Seca-Chr11 33622718 33624788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02280 1 189 AP2-EREBP Transcription Factor Family AT4G36920 53.202 6.17e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Seca11g02280 AP2 0.00025 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02280 K09284 - gmx:100794096 266.929