Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02268 ATGGAAACATCGGAGAATTGCTCTGTAAAAGTTGCTCTTCACATTCGTCCTCTCATTGCCGATGAACGACAACAAGGTTGCACTGAATGTGTTTCCGTTACCCCTGGAAAACCACAGGTTCAAATTGGGTCACATTCTTTTACATTTGATCATGTTTATGGAAATGGTGGATCCCCTTCATCTGACATGTTTGAGGAATGCATTGCTCCATTGGTTGATGGCTTATTCCAAGGATTCAATGCTACTGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACATATACCATGGGAACTGGCTATAGTGACAATGGTCGGACTGGGTTGATTCCTCATGTCATGAATACCTTGTTCAATAAGATTGAAACATTAAAGCATCAAACAGAATTTCAGTTGCATGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTAAGAGATTTGTTGGATACGGTATCTATGGGCAAATCAGAAACCTCATATTCTAATGGCCATTCTGGAAAAGTAACTGTTCCTGGGAAGCCACCAATACAAATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGATCAACTGAAGTTGCTGTAAGTACATTACAGGAGATGGCTGCTTGCTTGGAGCAGGGTTCCTTAAGTAGGGCAACAGGAAGTACAAATATGAACAGCCAGTCCAGTCGATCACATGCAATCTTCACAATTACATTAGAACAGATGCGCAAACTTCATTCAGTTTCTCCCAGCAATGACAGTTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGACGGTCTTCGTTTAAAAGAAGGTATACATATTAATAAAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTAGGGGATGAGAAAAAGCGAAAGGAGGGTCTACATGTCCCTTACCGGGATAGCAAGCTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTTATGATAGCTTGCATTAGCCCCGCTGACGTCAATGCTGAGGAAACTCTTAATACCCTCAAGTATGCGAACCGTGCACGCAATATTCAAAATAAGCCTGTTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAATACTTGCAGGCTGAGCTCTGTTCACGGGGAGGAGCTCCGACTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGAACTCTGTCGAAAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGGGATGTGAAATTGATGAACCAGATGAACATATTTATCTCATCAAAACTGATGGACTTGAGAGGCGCTTTCAGAGCTCAGATTCATCTGACCATGCCATGGCTGGAAGTGAGGATTCAAGGGAAACTGATGAAGCAGCAAAAGAGTTGGAGCATGCACTATTGCAAAATACCATGGATAAAGAGATGCATGAATTAAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGACACTGAAACACTCAAACAGCACTTTGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTTCAGCTAGAAAGGGACCGTTTGTTGCATGAAGTAGAGAATCTAGCTGCTAATTCAGATGGACTAGCACATAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAACACAGATTTTAGACCTCAAGAAGAAACAAGAAAATCAGGTGCAGCTACTGAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGTTACTCCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAATTATTGGAAGCTCGCAAGTCTTCTCCACGTGACAACTCTGGTAGAACTTGA 2121 0.4187 METSENCSVKVALHIRPLIADERQQGCTECVSVTPGKPQVQIGSHSFTFDHVYGNGGSPSSDMFEECIAPLVDGLFQGFNATVLAYGQTGSGKTYTMGTGYSDNGRTGLIPHVMNTLFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDTVSMGKSETSYSNGHSGKVTVPGKPPIQIRETSNGVITLAGSTEVAVSTLQEMAACLEQGSLSRATGSTNMNSQSSRSHAIFTITLEQMRKLHSVSPSNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKEGLHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELCSRGGAPTDEVRVLKERIAWLEATNEELCRKLHEYRSRCAFVEGCEIDEPDEHIYLIKTDGLERRFQSSDSSDHAMAGSEDSRETDEAAKELEHALLQNTMDKEMHELNKRLEQKESEMKLIGVDTETLKQHFGKKIMELEEEKRKVQLERDRLLHEVENLAANSDGLAHKTQDVRGQKLKALETQILDLKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSGRT. 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02268 706 MobiDBLite consensus disorder prediction 156 176 - -
Seca11g02268 706 Gene3D Kinesin motor domain 1 395 IPR036961 -
Seca11g02268 706 Coils Coil 375 395 - -
Seca11g02268 706 Coils Coil 407 427 - -
Seca11g02268 706 CDD KISc_KIF4 7 368 - -
Seca11g02268 706 Coils Coil 494 514 - -
Seca11g02268 706 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 Coils Coil 674 694 - -
Seca11g02268 706 Coils Coil 576 627 - -
Seca11g02268 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Seca11g02268 706 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 702 IPR027640 GO:0003777|GO:0007018
Seca11g02268 706 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 Pfam Kinesin motor domain 16 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca11g02268 706 MobiDBLite consensus disorder prediction 462 483 - -
Seca11g02268 706 FunFam kinesin-like protein KIN-4A isoform X1 2 395 - -
Seca11g02268 706 Coils Coil 526 560 - -
Seca11g02268 706 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca11g02268 706 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02268 Seca-Chr11 32532012 32541337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02268 9 400 Calmodulin-binding Proteins AT5G65930 34.343 1.56e-56 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02268 - - gmx:100790341 1245.72