Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02262 ATGGCCGTGGAGCTCATGATGGGTTACAGAAACGACAGTTTCACAGCCAAAGCCGAAGAGAATGCTGTTCAAGAAGCCGCCTCTGGTTTGGAGAGCGTGGAAAAGCTCATCAGGTTGCTCTCTCAGACTCATCAACAATACAACGCTTCTTCATCCTCTTCCCCTTCAAATCCAAACCAAATCGAAAGGGACTGCAAAGCCGTCGCTGATGTCGCTGTTTCCAAGTTCAAAAGGGTGATTTCTCTTCTGGGTCGAACCAGAACCGGCCATGCTCGTTTCCGAAGAGCCCCTTTGAACCAAACCCCACAACCACAACCTTCTTCTGAACCCACCACAATCCTCAACGCCACCCCTTTGCAGCAGATCCCACCCACCCACACCCACACCCCCACCACCACCTTTAACCACCACCAAATCCACAACACCGAACACCCTAAAATTGGAACAACCACAGAGAGAAAGGACTCATCCAAGACCCTTAATTTTTCCTATTCCTCTGCTGCCAATTCCTTCATCTCATCCCTCACCGGCGACGCCGACATCAAGCAACCGTCTTCGTCGTCTCCGCCGACGGCCTTTCAGATCACGAATCTGTCTCAGGTGTCATCGGCGGGGAAGCCTCCGCTTTCATCCTCTTCGTTGAAGAGGAAGTGCAGCTCTGAGATCTTGGGTTCTGGCAAGTGTGGCAGTTCCTCTAGCCGCTGTCATTGTTCAAAAAAGAGCAGGAAAATGAGGTTGAAGAGAGTGGTGAGGGTACCAGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCTTGGAGGAAATATGGACAGAAACCAATTAAAGGATCCCCTCATCCAAGGGGTTACTACAAGTGCAGTAGTGTAAGAGGGTGTCCAGCGCGCAAGCATGTAGAGAGAGCTTTGGATGATCCTTCTATGCTGGTAGTTACCTATGAAGGCGAGCACAATCATTCCCTTTCTGCAGCTGATGCTACTAATCTCATTCTAGAATCATCTTAA 1011 0.4946 MAVELMMGYRNDSFTAKAEENAVQEAASGLESVEKLIRLLSQTHQQYNASSSSSPSNPNQIERDCKAVADVAVSKFKRVISLLGRTRTGHARFRRAPLNQTPQPQPSSEPTTILNATPLQQIPPTHTHTPTTTFNHHQIHNTEHPKIGTTTERKDSSKTLNFSYSSAANSFISSLTGDADIKQPSSSSPPTAFQITNLSQVSSAGKPPLSSSSLKRKCSSEILGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSAADATNLILESS. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02262 336 MobiDBLite consensus disorder prediction 91 155 - -
Seca11g02262 336 MobiDBLite consensus disorder prediction 98 138 - -
Seca11g02262 336 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g02262 336 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g02262 336 FunFam WRKY transcription factor 65 247 324 - -
Seca11g02262 336 MobiDBLite consensus disorder prediction 139 153 - -
Seca11g02262 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 329 IPR044810 GO:0003700
Seca11g02262 336 Gene3D WRKY domain 248 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g02262 336 Pfam Plant zinc cluster domain 215 261 IPR018872 -
Seca11g02262 336 SUPERFAMILY WRKY DNA-binding domain 260 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g02262 336 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02262 Seca-Chr11 32270171 32272263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02262 19 321 WRKY Transcription Factor Family AT2G24570 45.122 7.63e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g02262 WRKY 3.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02262 - - cave:132186740 402.519