Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g02251 ATGATCTCCTACATTGGTTCATGGTGGAGGAGGGTTCTTGTTCTTACACTTGTTCTTCTTGTTACCATTGTTAACCAATGTTTCGGCCTAAACCGTGATGGTGTTCTGTTACTTTCCTTCAAGTACGCTGTGAGTGACCCTTTCAACGTTCTTGGAAGCTGGAATTACAGTGATGACACACCTTGTGCTTGGAACGGAGTTGCTTGTTCCACCATACCAACACCAACAAATGCTAATTCCACCACCCAATATCGTGTTACTGGTTTATCCTTACCAAATTCTCAGCTTCTGGGTTCGATTCCTTCTGATCTGGGTTCCATTGAACACCTCCAAATTCTTGACCTTTCCAATAATTCCCTCAATGGGTCACTTCCTTCTTCACTTTTCCAAGGCTCCTCTGAGCTTCAGTTCCTTAACTTGTCTAACAACCTCATAACAGGGGAAGTTCCAGAGTCCATAGTACAGCTAAGGAATCTTCAGTTTCTTAACCTTTCTGACAATGCTTTCGCGGGAAAACTGCCAGAAAATCTCTCAACCATGCAAAACCTAACCGTCGCTTCGTTGAAAAACAATTACTTGATCGGTTTTCTCCCTCGTGGATTGCGAACTTTGCAGGTTTTGGATCTCTCTACAAATTTGCTGAACGGTACTCTGCCTCCAGATTTCGGTGGTGACGCCATGCGTTACTTGAACATCTCATACAACAGATTCTCCGGCGAAATTCCGCACGAATTTCCGGTGAAAATTCCACGTAACGCGGTGGTTGACCTCTCTTTCAACAACCTCACCGGCGAGATTCCAGATTCTGAAGTTTTCCTGAATCAACCTTCAGAGTTTTTCTTTGGAAACTCTGATCTATGTGGAGAACCAACCAAGAATGCATGTCCTATTCCTTCTTCACCATCCTCAGAGCCAAGAGTATCATCTCCTACTTCTCCTCCTGCAATCGCTGCAATCCCAAAGACTTTTGATTCCCCTCCTCTGTCTCCAACAGGGTCCTCTGCTTCTGAAAAACAGAGTGGTCTCAGAGGAGGAACTGTTATAGGAATCGTGGTGGGTGATGTCATTGGAATTGCAATCTTAGCCATGATATTTATCTACGTTTACCGGTTGAAGAAAAAGAAGAAAGTTGAGAGTGCAATAAAGAACGAAGCAGCAGCAGCGAAAAGCGAGAGTTCATCATCAACCTCAGAGTCAAGAGGGTTCACGAGGTGGTCGTGTTTACGAAAAAGAACAGAAGAAGAAGAATCCTCGGAAACACCAGGTTCTTCCGACAGTGAAGTGGAACAACCAGGAAAAGATGGTGGTGAGAATCAGAAGCAACAAGAGAACAAAACGGGTACTTTAGTAACCGTTGATGGTGAAAGAGAGCTTGAACTTGAAACTTTGTTGAAGGCTTCAGCATACATATTGGGTGCTACTGGTTCAAGCATAATGTATAAAGCTGTGCTTGAAGATGGCACGTCGTTAGCGGTTCGAAGAATCGGTGAGAGTGGCGTGGAACGGTTCAAGGATTTCGAGAATCAGGTTCGGGTCATAGCTAAACTGGTTCACCCTAATCTGGTTCGGGTTCGTGGGTTTTATTGGGGTCATGATGAAAAGCTCATCATCTATGACTTCGTTCCAAATGGTTGCCTTGCCAATGTTCGTTACAGGAAGGTGGGCTCCTCGCCTAGTCACTTACCGTGGGAAATTCGGCTCAAGATAGCGAAAGGGGTCGCACGTGGGCTGGCTTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCTAGTAATATTCTATTGGGCAATGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGAATTGTAACCGGTGACACCAGTTATAAAGCTGGAGGATCCGCGCGAATTTTTGGGAGCAAGAGATCCACCGCCTCACGTGATAGCTTCCAAGACATCACATTTGGGCCCAGCCCGAGCCCGAGCCCGAGTTCGATAAGTGGTGTGTCTCCTTACCATGCTCCTGAGTCGCTCAGGAACCTCAAGCCTCACCCGAAATGGGATGTGTACTCTTTTGGTGTCATGTTTCTTGAACTGCTAACTGGGAAGGTTGTGGTTTTGGATGACATGGGCCAAGGGCCTGGGGTTTTAGTTGAGGATAAGAACCGGGCTTTGAGGATGGTTGATGCGACTATCCGTGTTGACATGGAGGGTAGGGAAGAGGCCTTGTTGGGCTATTTCAAGTTAGGGTACAGTTGTGTGTCTAGTGTACCACAAAAAAGGCCACCAATGAAAGAGGTGTTACAAGTTCTTGAAAAGATCCCATCTTCTTCTACATCGTCGTATTATTATAGTCACTAA 2334 0.4576 MISYIGSWWRRVLVLTLVLLVTIVNQCFGLNRDGVLLLSFKYAVSDPFNVLGSWNYSDDTPCAWNGVACSTIPTPTNANSTTQYRVTGLSLPNSQLLGSIPSDLGSIEHLQILDLSNNSLNGSLPSSLFQGSSELQFLNLSNNLITGEVPESIVQLRNLQFLNLSDNAFAGKLPENLSTMQNLTVASLKNNYLIGFLPRGLRTLQVLDLSTNLLNGTLPPDFGGDAMRYLNISYNRFSGEIPHEFPVKIPRNAVVDLSFNNLTGEIPDSEVFLNQPSEFFFGNSDLCGEPTKNACPIPSSPSSEPRVSSPTSPPAIAAIPKTFDSPPLSPTGSSASEKQSGLRGGTVIGIVVGDVIGIAILAMIFIYVYRLKKKKKVESAIKNEAAAAKSESSSSTSESRGFTRWSCLRKRTEEEESSETPGSSDSEVEQPGKDGGENQKQQENKTGTLVTVDGERELELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKVVVLDDMGQGPGVLVEDKNRALRMVDATIRVDMEGREEALLGYFKLGYSCVSSVPQKRPPMKEVLQVLEKIPSSSTSSYYYSH. 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g02251 777 Gene3D Ribonuclease Inhibitor 30 200 IPR032675 -
Seca11g02251 777 FunFam Leucine-rich repeat receptor-like protein kinase 30 199 - -
Seca11g02251 777 Pfam Leucine rich repeat 109 168 IPR001611 GO:0005515
Seca11g02251 777 ProSiteProfiles Protein kinase domain profile. 465 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g02251 777 FunFam Leucine-rich repeat receptor-like protein kinase 202 297 - -
Seca11g02251 777 MobiDBLite consensus disorder prediction 385 451 - -
Seca11g02251 777 MobiDBLite consensus disorder prediction 386 403 - -
Seca11g02251 777 Gene3D Transferase(Phosphotransferase) domain 1 542 774 - -
Seca11g02251 777 SUPERFAMILY L domain-like 29 290 - -
Seca11g02251 777 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 87 764 - -
Seca11g02251 777 SUPERFAMILY Protein kinase-like (PK-like) 470 767 IPR011009 -
Seca11g02251 777 Gene3D Phosphorylase Kinase; domain 1 434 540 - -
Seca11g02251 777 Gene3D Ribonuclease Inhibitor 201 297 IPR032675 -
Seca11g02251 777 MobiDBLite consensus disorder prediction 295 310 - -
Seca11g02251 777 MobiDBLite consensus disorder prediction 326 341 - -
Seca11g02251 777 MobiDBLite consensus disorder prediction 404 418 - -
Seca11g02251 777 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Seca11g02251 777 MobiDBLite consensus disorder prediction 640 662 - -
Seca11g02251 777 Pfam Protein kinase domain 471 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g02251 777 PRINTS Leucine-rich repeat signature 110 123 - -
Seca11g02251 777 PRINTS Leucine-rich repeat signature 201 214 - -
Seca11g02251 777 CDD STKc_IRAK 471 765 - -
Seca11g02251 777 MobiDBLite consensus disorder prediction 640 663 - -
Seca11g02251 777 SMART LRR_typ_2 156 180 IPR003591 -
Seca11g02251 777 SMART LRR_typ_2 107 131 IPR003591 -
Seca11g02251 777 SMART LRR_typ_2 201 224 IPR003591 -
Seca11g02251 777 MobiDBLite consensus disorder prediction 292 341 - -
Seca11g02251 777 FunFam Os07g0541700 protein 546 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g02251 Seca-Chr11 31844648 31847639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g02251 10 777 Receptor kinase-like Gene Family AT4G37250 58.081 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca11g02251 Pkinase 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g02251 - - gmx:100784503 1129.78